| Protein name |
Zinc finger CCCH-type-containing 13
|
| Main knot |
Unknown (97%)
|
| Knot fingerprint |
K Unknown 31#31(x6) 819(x5) 815 52(x5) 51(x11) 31(x6)
|
| Global pLDDT |
49.58
|
| Species |
Danre
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v1:
 A0A0R4IY72
|
| PDB structures |
-
|
| Model length |
1766
|
| AlphaFold deposition date |
2021-07-01
|
| AlphaKnot deposition date |
2021-12-18
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
 |
46.1 | 240-1092 | 853 | 1-239, 1093-1766 | 239 | 674 |
|
Knot | ||||
 |
57.1 | 559-988 | 430 | 1-558, 989-1766 | 558 | 778 | Slipknot | |||||
 |
45.2 | 207-1059 | 853 | 1-206, 1060-1766 | 206 | 707 | Slipknot | |||||
 |
45.2 | 149-1356 | 1208 | 1-148, 1357-1766 | 148 | 410 | Slipknot | |||||
 |
44.6 | 252-1410 | 1159 | 1-251, 1411-1766 | 251 | 356 | Slipknot | |||||
 |
48.6 | 569-1412 | 844 | 1-568, 1413-1766 | 568 | 354 | Slipknot | |||||
 |
46.9 | 489-1348 | 860 | 1-488, 1349-1766 | 488 | 418 | Slipknot |
Model Sequence |
MSKIRRKVTVENSKTISDSSSSTTTPSRRPSVFERLGPSTASNAAETHCRNWLKTGNCSYGNTCRYTHGTPSRGKGFSGTFNRSAERPTGDLRERMKNKRQDVDGDAPKRDADEPTSPTTRQRDSSRGRHREKEDIKITKERTPASEEETADWEASREDSDNGDYDYELSLEMKRQKIQRELMKLEQENMDKREEIIIKKEESVSKTRTGSSSKDRASPEHTSSKGSPSSRKSSGSPKHRGGKGGNPSKKEKKSSTSSVISSPVSDQTRAEETDSRSSKSGHGKRKGPRTPSPPPPVPVENPVVGKKHKNKHKNKDKSEDKTKEGKERGRDAEKHKEKKEKRRDRSDSSHKAKRSMTSEERSGSLSPPSREASPPARRKSSSPKPSSKQASQHRSRTPPRHRRSTSPSSRQQQSPSSQSGSSAQRHSPSPRHRRSSITPSASPPPTQSSRRSRSSITPQRDPSPASAPRRSSPSASHRSQGRERERERERDRDRGRAEQERSPAVQERRHERRDESRGKREKDSSRDERDYDIVQSSSREERDCRDSRDRRGERDRRDVREERQHRGDVKDTRDARAAETRERSGREPLEHRERDRDRERERERERERERTEMHRKEETMTQEERSYGRGHGREDMRNDARTDNRNESRVERTGRGRGHGSDVTEKARGSRASQADNSSASGHDSWESRSSGLRERSTERNTDRDRYDDRPRGEQPRDERRGAHNERDRRDNRERAEQRAPSPVRQQNRGEDLEREERRDDRRNDRGDDRRDDRTREREKERDREREREREREKEREREKEREREAERERERTREREREREREREEREREREEREREREERERERERERKEREREREQRERERQREWDEREKGREERRERRDESREDRPPRDAHEDRKNIRKRHRAENTPSPRPSPKRARDVSPPDSDGYNSTEEKSDKHRLLSQVVRPQETARSPVRSFTDEKHSRWKDEDRRVDKKDVRGRHEEVDSRGERAGRAAERRGEHASDVSVTGVPESRRGKEQRDLPSTALTPPMEERDALSAVHEETKKKTKTQKKNMKKNRKEDDGVSGGGDRSNPEPPISSTVAEAPPALLSPRKTPKKKALERKRKRSRGAESDVSEDELVTQQPLSKRRRGPRTPPPINKDDLPSQRALTAGQSSLPVKLDANFSDWSDEDVPERGETSTASMPSDRPPERLPPRRGARGGGRDRTDPPIAPLLPDPPMLMQSLPLQPLLPQHMLRKPQQADMQQQQRSSSMGSNQSRASSRRLRSPSNESAHRDDGPQGMRSRRGLLQGGNSRERDRERERERERERERDRDRERVVANEQMVGERKSRIDQLRRGEPSRSTSSDRQDSRSHSSRRSSPESERQARSRAGSYDSRERDRERDRDPLDREREKNRQLQNQQSQQREPEAREWGGRGREPLLRGNREPIRERDLREMRERERLLPEGLLAHERMDRERGERDRERDRDRMLPFDLQTHRDSKSRAEMKMDRAEYEPLLPREVLKDVEKPADNSHLQGEASEPEKMDSLDEEEDGKADDAQSVVSGGEEYEPISDDELDEILADSQKRDEQQDDEKTSGPLDVIDVDWSSLMPKQKQEPRTPGAALLRFTPGAVLLRAGVSRRLAGPQLLARIKEVCAREIEDPKGNYSSCTDVLNKQHDLGALNMAAYNRRMERASLLRSLGPCCKALCARRDIAIRRQLLKNDKGTTKQIYTSAPVVDNELVQLSLRLFKKKMASTQSSGQDKTDSASAAQQLNTPTEMCVS
|
| Domain |
Eukaryota
|
| Family |
Danionidae
|
| Species (Full Name) |
Danio rerio
|
| PDB structures (whole Protein) |
-
|
A0A0R4IY72