| Protein name |
Nucleoprotein TPR
|
| Main knot |
Unknown (100%)
|
| Knot fingerprint |
K Unknown 76 73(x15) 52(x2) 41(x4) 31(x15)
|
| Global pLDDT |
60.78
|
| Species |
Danre
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v1:
 A0A0R4IYL8
|
| PDB structures |
-
|
| Model length |
2363
|
| AlphaFold deposition date |
2021-07-01
|
| AlphaKnot deposition date |
2021-12-18
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
 |
45.7 | 1274-2207 | 934 | 1-1273, 2208-2363 | 1273 | 156 |
|
Knot | ||||
 |
59.5 | 1221-1738 | 518 | 1-1220, 1739-2363 | 1220 | 625 | Slipknot | |||||
 |
64.6 | 165-1969 | 1805 | 1-164, 1970-2363 | 164 | 394 | Slipknot | |||||
 |
61.4 | 186-2157 | 1972 | 1-185, 2158-2363 | 185 | 206 | Slipknot | |||||
 |
54.2 | 1030-2001 | 972 | 1-1029, 2002-2363 | 1029 | 362 | Slipknot | |||||
 |
46.7 | 1186-2228 | 1043 | 1-1185, 2229-2363 | 1185 | 135 | Slipknot |
Model Sequence |
MAALLQQALERTEVNKLPKAIQNKLEKVLAEQQTEIDSLISQHERYKADCEQQYFNLEKKLAESQEQFLSQSKDYHNIKEENNRLVEELKKLKEIEEVQGTTQESKPPRAKYEIEAENRELSRLLEKRSQEVENLSEDLKRLNDKLVETNTIKMELQLKLDELQSSEVSIQYREKRMEQEKELLQNQNTWLNTELKSKTDELYTVSRDKGKENLELRCSLESKKEEVTRLQDQVNTLKKANDSMQKSTEDLMRKLKEAKEQRASMEEKYRNELNANLKLCNLYKGAASDSEAKNTELNRAVEELNKLLKEAMEANKGTEKKLSELQSVREKAESDLREKVRHLEKELENSNTRLADFKRRGVPALTEEELTNLSPTAAAVAKIVKPGMKLMELYNAFVEAQDQLHLEKLENKRVNKVLDEIVLEVETKAPILKRQREEYESMQKSMTSLCYKLEQAMKEVHRLQKETDEANKRALVLERDNQKSERQLADMSEQVRVLLVEVEEARGNQVVREDVSSAVSSSSEVQGSRQVAFRSIQELQQQNQNLLVKIRDLEEQREKDQNQAKSAKQTELEQSLEKVQKELEQIKEQQNHQKLLAESAIRQRDMYRILLQTAGVELPPQGSDGGSQSTTPSRPGPMATRSTPLRAAAAESFQATQSKAALKQINDAFTTYKKEKAENDKLLNEQIERLRGQVSDLLSQKAKLSSQLEFASKRYDMLQENVNGFRRETEALRERNQKMSATHQRHEQIIHTMTQDLREANEKLTMSESRAENIRKERDILKQVENRLNQEKESILTEQRSQNLLLTNLKSIQLTMERSETETKQRYNNQIQHLEKEIIQLKKRLEQEVEQRHALERNQDTQLLEAKKKLESQTALHQKTKELLRSAEQQVTSLRQQLNNNENQSAAPKQPVRTLPRVSAPSVPQQEADDLRARLQQVEEQNSDLKERLKNTTTNVEQYRSMVLSLEESVNKEKQLAEQARTSTDNQLKMARELNQQLEARLVEAEKEKLELQQEKMKAVDSVEERVKELKRSMTNMQTELQEALQRSTAAVTQEQKATQDSKVQAKLAAEAQNKYERELMLHAADVEALQAAKKQGQLLTQNMKQLEEKAQKAASELHQYRTDWVMQEKRLKETLSKEQKRAEELQKQNTLLHEQMENLSSKITASTQQETGESSLNISLNEEGKSHEQILDILRFVRREKEIAETRLEVAEVETLRYKQRMEYLECELKELQDSLNVEREKLQVTTKTLVQQEETMKRMESMSALTDTNKMLKNEKNRLEHELQQTQAKMRKLEADIKPLQEANGELSEKSGMLQAEKRLLEEDVKRLKSRTQQLLNQQKDSDQEESKKLHSERETHLKRIQQLTEETGKLKNEVARSQASITTAQSQVQNLQDSLGKVTTERDSLKKELEAKTLDIQEKVKTITQVKKIGRRYKTQYEELKEQHDKMVAEAASKPAQEQEDRQASVQEIQNLKSSLSQTQNRTSELETQLDCIQKTLQEREAEVKSLQEQLTQVQPELSRLKAELQEKGKLEEQLRQQIADKEEKTKKAFLGAKQKLNQLNSAKEQLAKENEELKLQREELEVRMSALKSQYEGRLSRQERELRELREQQERHGEQRDEAQEPGQSKVQEAPRSSDARQITLKPTPAADRGSVVYSFFQISSIKSASQSEPPTANIKPTLVAATPSKPSPIAGSKSTPKASIRPMITPAPVTTPTATVMPTTQVETQEALQSTEGPLEHVTVFGSTSGSVRSTSPNIQTTQPILSLQQSQATAFVQPTQQQASQEPATSIMEAVHSSQMERPSTSTAVFGTVSATTGSSVAKRVREEHEESSTEVTDTTQDDSTHPPIMKKLRIVRRVGLEDASGTEESNDAMGESSGDVQQPPDASEEAYPVLGEGDEESLSAPMDQVSESQPSESQISGQDSSEEYKHDVIVIETDSATEEEEEEEEEQEEPGQYEDDDEDEDDDAEDEDDEDGDGGMAEAAEESNEGSGSADANEAYEGDEAEQGAGEADPSVHNEESQEASDSTQKQPDSQSSEASVSTLEAFPLEPVREHPPLPSTTTTSLAPRLPQSPRRPHHTPPPRLNIHPVPELGPPIMQRQSGQSRRPSMSRAPQLTPGIGSMQHFFDDDDRMVPSTPTLVVPHRTDGFAEAIHSPQVAGVPRFRFGPPEDMMPQASSSHSDLSHLATHGGLGMYESPLFLPTHDEESGGRSVPTTPLQVAAPVTVFTESHPSDVSETASQSVPMVSTSTASLSAPGEAVPGDDGDDVFVAEAESEGVSSEACLESQLELDSAQPADDASLPSTSQEPTSSSADTSTSSGQAKPAGRLLPQHHLPRRNQLIRRGFPRGGRGRGLSRGSPF
|
| Domain |
Eukaryota
|
| Family |
Danionidae
|
| Species (Full Name) |
Danio rerio
|
| PDB structures (whole Protein) |
-
|
A0A0R4IYL8