| Protein name |
Acetoacetate decarboxylase
|
| Main knot |
52 (60%)
|
| Global pLDDT |
81.94
|
| Species |
Gemmatimonas sp
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A0S7ZQV1
|
| PDB structures |
-
|
| Model length |
332
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
83.2 | 25-239 | 215 | 1-24, 240-332 | 24 | 93 |
|
Model Sequence |
MIELRKDQLHIRFPELHPQARMSIDFQRTLRIPDDGKDYPLPAGLGRFPLRHVDDFGPDVPERWLEHGGVMLPMYQSEALWINFAGGYPFAVKIAAGKIDAVTGKTWSNSLHRHPQNYVTVPEQPWLDGYCVAKGVIRQFVAMPLGSGYSAEEQLTGEAEHGGLQIVAYPLKRDVYEEWAAKRQAVFSKSFTPMLAMRCTGVPDMGLAPGGRMRQEIYDDPFKLTDWDPEHAARCFVHIANSQVWRAITGEAPPTVPLTAREYKRNGIPWFEYYSDGKAVEGSGVLDRLKSIAQFATGQRDEPLSDNDSVEIDRIVVLRQGLEKGQVREGRF
|
| Protein name |
Acetoacetate decarboxylase
|
| Main knot |
52 (55%)
|
| Global pLDDT |
72.85
|
| Species |
Gemmatimonas sp
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
332
|
| ESM generation time |
2023-06-24: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
86.7 | 26-255 | 230 | 1-25, 256-332 | 25 | 77 |
|
Model Sequence |
MIELRKDQLHIRFPELHPQARMSIDFQRTLRIPDDGKDYPLPAGLGRFPLRHVDDFGPDVPERWLEHGGVMLPMYQSEALWINFAGGYPFAVKIAAGKIDAVTGKTWSNSLHRHPQNYVTVPEQPWLDGYCVAKGVIRQFVAMPLGSGYSAEEQLTGEAEHGGLQIVAYPLKRDVYEEWAAKRQAVFSKSFTPMLAMRCTGVPDMGLAPGGRMRQEIYDDPFKLTDWDPEHAARCFVHIANSQVWRAITGEAPPTVPLTAREYKRNGIPWFEYYSDGKAVEGSGVLDRLKSIAQFATGQRDEPLSDNDSVEIDRIVVLRQGLEKGQVREGRF
|
| Domain |
Bacteria
|
| Family |
Gemmatimonadaceae
|
| Species (Full Name) |
Gemmatimonas sp. SG8_17
|
| Gene |
AMS18_12450
|
| PDB structures (whole Protein) |
-
|
A0A0S7ZQV1