A0A0S8JNI3F1

TraB/GumN family protein
AF4
Categories voted by users:
Information
Protein name
TraB/GumN family protein
Main knot
31 (62%)
Global pLDDT
84.97
Species
Bacteroides sp
UniProt
Structure Prediction Model
AlphaFold v4:  A0A0S8JNI3
PDB structures
-
Model length
307
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
84.7 18-163 146 1-17, 164-307 17 144
Model Sequence
MIIMKNLKQSIFILTAAILIFSIPQNIFGRDSGSGDVFIWETHIKACTLFIAGSVHVGKKDSYPLHETYLEYLERSDKIILEVAENFENIHNIMSEYIQKDRLPEDKYFRHTLQPEIRDRIIDILGSDQFYRFDQYNAWVLIMQLAVNKMRLLDYDPLLAVDRYIWDQAFAAGKEISGLESVEEQFRLLEFDLPYDIQLKIIERNVGNILIAAEKEGALYDAYFNNHVEKFGKIFTTRFNFEDPVEKTAYNKVFTQRNKTWANNLEELANKHHGAIFVAVGAGHLFGPGNLLECLREKGYEIHQAGW
Comments
ESM1
Categories voted by users:
Information
Protein name
TraB/GumN family protein
Main knot
52 (50%)
Global pLDDT
85.71
Species
Bacteroides sp
UniProt
Structure Prediction Model
PDB structures
-
Model length
307
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
53.8 14-282 269 1-13, 283-307 13 25
Model Sequence
MIIMKNLKQSIFILTAAILIFSIPQNIFGRDSGSGDVFIWETHIKACTLFIAGSVHVGKKDSYPLHETYLEYLERSDKIILEVAENFENIHNIMSEYIQKDRLPEDKYFRHTLQPEIRDRIIDILGSDQFYRFDQYNAWVLIMQLAVNKMRLLDYDPLLAVDRYIWDQAFAAGKEISGLESVEEQFRLLEFDLPYDIQLKIIERNVGNILIAAEKEGALYDAYFNNHVEKFGKIFTTRFNFEDPVEKTAYNKVFTQRNKTWANNLEELANKHHGAIFVAVGAGHLFGPGNLLECLREKGYEIHQAGW
Comments
Domain Bacteria
Family Bacteroidaceae
Species (Full Name) Bacteroides sp. SM23_62
Gene AMS26_20205
PFAM codes  PF01963
InterPro codes  IPR002816
PDB structures (whole Protein) -
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