| Protein name |
Type I secretion protein
|
| Main knot |
819 (87%)
|
| Global pLDDT |
75.06
|
| Species |
Ruegeria profundi
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A0X3U2P1
|
| PDB structures |
-
|
| Model length |
646
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
88.8 | 284-578 | 295 | 1-283, 579-646 | 283 | 68 |
|
Model Sequence |
MSLDSITEQIAHFVGTFELTTEQARWRDQYEEFVALRRKAELENLEDPTRIEVKAPLKMNPGDYDPISYKFAPLKSDLPPPAVSPGPVEDAVLMSNPAFGPDVFFPEMLGFGDGVQFNVILKPEFIHQLIGSAVTYTVQKIHLNDNDVVGEGNFRDAEAIMEQGQALKAVAMSLHAVSTPSIHIQDYQSGEAIEQLIEQMQSPVTIDIEGVTVHQFHGEDATGIIVNGEHVDEMPDFLELMPEHHKNDLEEEEDEYGISDDLPAEWDQSEDQEFEDGHSIVAGGNFAVNEVAVTVGWVDAPNIVVGGQAVNLTFVSQVAVVTDVDQGEGAQSKTQVLQASDISTEANEAAWLELNVAEDPEQDPIVSIDWISGDLLVTNFIQQLIDATDIDHIATEITSSSTVYTLGDNILTNVTNILQLGTYYDVIIIGGDMISVDVVTQTIVFTDNDVIHGAHTTDAEDNLVMNQVSLKTEGQDSHTEMSANLASTVDLQEVDTDALEDALLNDPMFAGTELIRVLKIEGDLMQVNVIDQVTMLQDDDDVYVETPGGEEVSALGAGNALLNAASVTKMGVDSVVMAQEGEYSELMLHQASMFDSPEEENPELVNEAIAMLLEEVDAAANEVENAANLTSSEMATIDDGLQTMLA
|
| Domain |
Bacteria
|
| Family |
Roseobacteraceae
|
| Species (Full Name) |
Ruegeria profundi
|
| Gene |
AVO44_03315
|
| PDB structures (whole Protein) |
-
|
A0A0X3U2P1