A0A101H9I6 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Plasmid pRiA4b ORF-3 family protein
Main knot	3₁ (49%)
Global pLDDT	93.0
Species	Clostridiales bacterium
UniProt	A0A101H9I6
Structure Prediction Model	AlphaFold v4: A0A101H9I6
PDB structures	-
Structure in AlphaLasso	A0A101H9I6: L_+1N
Model length	380
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					94.2	2-101	100	1-1, 102-380	1	279

Model Sequence

MLIKCTKKLLDTLDVKVAEDHQESLSFSWHANVVTVNRRKTVILLNDLNRYVIVLYGLKKKDFSNLDKMILRAMVEVFKDECINEDIINAYFQQAGGISFTTTDDRSSTSRLNRVADWVNQFYDLLIDDRIIQAPLSMRISRMLVSTGKGRQEYVVPIRQFHKNLEESYGKPVIKCKAVVIKVNLDLDNFDVWRRLIVPVNTTYTVLHEVLQKAFGWQDCHLHQFFIYGDQKPVNMSMINHPSFHREGYIPTLNIVSDEYAFEDPDELEMVWENGLKVSEIPFQHAKYTYDFGDNWQHYIEVEGMMEDFDCNHPVFVDGSGDTPPEDVGGESGYENFLDIMSDPEDEEHENFRLWAEEQGYRKYDPVYVKKAVERLFNRY

Comments

ESM1

Categories voted by users:

Information

Protein name	Plasmid pRiA4b ORF-3 family protein
Main knot	3₁ (45%)
Global pLDDT	88.54
Species	Clostridiales bacterium
UniProt	A0A101H9I6
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Structure in AlphaLasso	A0A101H9I6: L_+1N
Model length	380
ESM generation time	2023-06-27: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					92.0	2-100	99	1-1, 101-380	1	280

Model Sequence

Comments

Domain	Bacteria
Family	unclassified Eubacteriales
Species (Full Name)	Clostridiales bacterium 38_11
Gene	XD91_1079
PFAM codes	PF07929
InterPro codes	IPR012912, IPR024047
PDB structures (whole Protein)	-

A0A101H9I6F1

AF4

Model Sequence

ESM1

Model Sequence