A0A124RGH7 | AlphaKnot 2.0

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Information

Protein name	PepSY domain-containing protein
Main knot	5₁ (88%)
Global pLDDT	87.54
Species	Burkholderia ubonensis
UniProt	A0A124RGH7
Structure Prediction Model	AlphaFold v4: A0A124RGH7
PDB structures	-
Structure in AlphaLasso	A0A124RGH7: LS_2++C
Model length	105
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					96.6	38-95	58	1-37, 96-105	37	10

MKLKTAMTLALLVAPCLASAGKLDKSCTYKGIHLQGRVKVVKFHPDLKVRINKYFPDLYVQRVDIHPSECGRWKFVDSDYDFTIQYVDSFEDIEVKWTDSFPGVR

Comments

Categories voted by users:

Information

Protein name	PepSY domain-containing protein
Main knot	5₁ (89%)
Global pLDDT	76.13
Species	Burkholderia ubonensis
UniProt	A0A124RGH7
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Structure in AlphaLasso	A0A124RGH7: LS_2++C
Model length	105
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					44.1	38-95	58	1-37, 96-105	37	10

MKLKTAMTLALLVAPCLASAGKLDKSCTYKGIHLQGRVKVVKFHPDLKVRINKYFPDLYVQRVDIHPSECGRWKFVDSDYDFTIQYVDSFEDIEVKWTDSFPGVR

Comments

Domain	Bacteria
Family	Burkholderiaceae
Species (Full Name)	Burkholderia ubonensis
Gene	WK95_27570
PDB structures (whole Protein)	-

A0A124RGH7F1