A0A133NRN5F1

Putative tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) (tRNA (cytidine/uridine-2'-O-)-methyltransferase)
AF4
Categories voted by users:
Information
Protein name
Putative tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) (tRNA (cytidine/uridine-2'-O-)-methyltransferase)
Main knot
31 (92%)
Global pLDDT
76.48
Species
Gardnerella vaginalis
UniProt
Structure Prediction Model
AlphaFold v4:  A0A133NRN5
PDB structures
-
Model length
230
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
92.3 151-197 47 1-150, 198-230 150 33
Model Sequence
MTNMQDASKEDKSMQDAQNPDSQNPVNRVEQMYEYGYRKSNYGPDELVTDAHGNPISVMDAMLSAQDASTAQTQTPHLCFYSPRIPGNTGSAIRLCAVTGTILHLVEPLGFNLQDTKLRRAGLDYHDMAHVVMHPNFENLVESMPNSRIIAFTANATKLYTDIEYKPNDILLFGPEPGDIPDPMDIMAGPHVAEQVRLPMRPSLRSLNLTNCASIAIYEAWRQLGFEGGK
Comments
ESM1
Categories voted by users:
Information
Protein name
Putative tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) (tRNA (cytidine/uridine-2'-O-)-methyltransferase)
Main knot
31 (87%)
Global pLDDT
74.47
Species
Gardnerella vaginalis
UniProt
Structure Prediction Model
PDB structures
-
Model length
230
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
51.7 151-197 47 1-150, 198-230 150 33
Model Sequence
MTNMQDASKEDKSMQDAQNPDSQNPVNRVEQMYEYGYRKSNYGPDELVTDAHGNPISVMDAMLSAQDASTAQTQTPHLCFYSPRIPGNTGSAIRLCAVTGTILHLVEPLGFNLQDTKLRRAGLDYHDMAHVVMHPNFENLVESMPNSRIIAFTANATKLYTDIEYKPNDILLFGPEPGDIPDPMDIMAGPHVAEQVRLPMRPSLRSLNLTNCASIAIYEAWRQLGFEGGK
Comments
Domain Bacteria
Family Bifidobacteriaceae
Species (Full Name) Gardnerella vaginalis
Gene HMPREF3216_00255
PFAM codes  PF00588
InterPro codes  IPR001537,  IPR016914,  IPR029026,  IPR029028
PDB structures (whole Protein) -
How to cite