| Protein name |
Signal peptide protein
|
| Main knot |
31 (91%)
|
| Global pLDDT |
81.91
|
| Species |
Rhodoplanes sp
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A140GV22
|
| PDB structures |
-
|
| Structure in AlphaLasso |
 A0A140GV22: LS4+++-C
|
| Model length |
163
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
86.8 | 28-143 | 116 | 1-27, 144-163 | 27 | 20 |
|
Model Sequence |
MSVMRIRTAFILAAALAAPAAAYSVMADVPKELPRLSNCFANGASTYQIVAKATAPDYRIRIDSAAAHPDLRMQLVDRPEHADFVLVDDADGEPGTCRSARTVTHDGSAGKPDVTVQLSTDTKNVDYRLYVRSARFSQQDAAALLAAMWKADRGRKVADLAPR
|
| Protein name |
Signal peptide protein
|
| Main knot |
01 (95%)
|
| Species |
Rhodoplanes sp
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Structure in AlphaLasso |
A0A140GV22: LS4+++-C
|
| Model length |
163
|
| ESM generation time |
2023-06-24: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
Model Sequence |
MSVMRIRTAFILAAALAAPAAAYSVMADVPKELPRLSNCFANGASTYQIVAKATAPDYRIRIDSAAAHPDLRMQLVDRPEHADFVLVDDADGEPGTCRSARTVTHDGSAGKPDVTVQLSTDTKNVDYRLYVRSARFSQQDAAALLAAMWKADRGRKVADLAPR
|
| Domain |
Bacteria
|
| Family |
Hyphomicrobiaceae
|
| Species (Full Name) |
Rhodoplanes sp. Z2-YC6860
|
| Gene |
RHPLAN_02720
|
| PDB structures (whole Protein) |
-
|
A0A140GV22