A0A147HQT3 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Thiamine permease
Main knot	3₁ (43%)
Global pLDDT	83.0
Species	Sphingomonas endophytica
UniProt	A0A147HQT3
Structure Prediction Model	AlphaFold v4: A0A147HQT3
PDB structures	-
Model length	287
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					84.6	2-250	249	1-1, 251-287	1	37

Model Sequence

LGLSLLQTLAVIVVGNLFGAALFAAFCLMGHRTGVPQMVLGRLAFGRRGAYLPALAQVLMPMGWVAINTWIVLDLCMAALERMGIGGGVELQYAIAVLVMLFQVGIAAWGFNAIKVFERYTMPVILLIMAVMTALAFLRVDIKWQSAAVTGMPAFAAATQLMTAIGIGWGLSWLTYASDYTRFPRPSLGAAKVFRATFLGMFAPTVWLAFLGAAIASAGAGSDPSKLIIAAFGTIALPVLLVLLHGPIATNIVVIYSAALSSLALDLRRPRWVISVASGLIASAILY

Comments

ESM1

Categories voted by users:

Information

Protein name	Thiamine permease
Main knot	3₁ (42%)
Global pLDDT	93.04
Species	Sphingomonas endophytica
UniProt	A0A147HQT3
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	287
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					94.3	2-250	249	1-1, 251-287	1	37

Model Sequence

Comments

Domain	Bacteria
Family	Sphingomonadaceae
Species (Full Name)	Sphingomonas endophytica
Gene	NS334_17270
PFAM codes	PF02133
InterPro codes	IPR001248, IPR026030
PDB structures (whole Protein)	-

A0A147HQT3F1

AF4

Model Sequence

ESM1

Model Sequence