| Protein name |
Type II restriction endonuclease
|
| Main knot |
81 (62%)
|
| Global pLDDT |
91.29
|
| Species |
Cytobacillus oceanisediminis
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A160MI10
|
| PDB structures |
-
|
| Model length |
279
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
92.8 | 30-254 | 225 | 1-29, 255-279 | 29 | 25 |
|
Model Sequence |
MSRIPAETLMEKFIEDGHYPELKKTEGTLKTLTNSIKTALESSESKRHVFEKWNLVGRFTAKKIYNVDYIGLNEYLYDVGLLLQVTEIDNKAIKTNELYHDMIQDFRLPETFYVKPNFNKAGKELIKSKFEIPDHWGINEAAQHIGQLKPRAKELAQQYEGLKSKLVHLIEKDQQKSIKQPISHKYGSISLVANQPKYDISAIYDYLGEWLLIEYGKPNSKLLEHYILNGMLSERDIEPFKTVKDIRLDFSVMTLEDEEKFLTMKDIKKQISAANRVGA
|
| Protein name |
Type II restriction endonuclease
|
| Main knot |
81 (59%)
|
| Global pLDDT |
91.37
|
| Species |
Cytobacillus oceanisediminis
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
279
|
| ESM generation time |
2023-06-24: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
94.5 | 30-250 | 221 | 1-29, 251-279 | 29 | 29 |
|
Model Sequence |
MSRIPAETLMEKFIEDGHYPELKKTEGTLKTLTNSIKTALESSESKRHVFEKWNLVGRFTAKKIYNVDYIGLNEYLYDVGLLLQVTEIDNKAIKTNELYHDMIQDFRLPETFYVKPNFNKAGKELIKSKFEIPDHWGINEAAQHIGQLKPRAKELAQQYEGLKSKLVHLIEKDQQKSIKQPISHKYGSISLVANQPKYDISAIYDYLGEWLLIEYGKPNSKLLEHYILNGMLSERDIEPFKTVKDIRLDFSVMTLEDEEKFLTMKDIKKQISAANRVGA
|
| Domain |
Bacteria
|
| Family |
Bacillaceae
|
| Species (Full Name) |
Cytobacillus oceanisediminis 2691
|
| Gene |
A361_28680
|
| PDB structures (whole Protein) |
-
|
A0A160MI10