| Protein name |
Orphan protein
|
| Main knot |
31 (49%)
|
| Global pLDDT |
85.18
|
| Species |
Methylomonas sp
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A172UDD3
|
| PDB structures |
-
|
| Model length |
207
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
84.6 | 2-115 | 114 | 1-1, 116-207 | 1 | 92 |
|
Model Sequence |
MIDIHATKKLYAKLPAPISAPQSETTPLTPTLSLGEREQNPLSGWHANLLILQRRNCVLLVHDATRFPLFVKGLLKADFANFDHLFADALMNTLLKLGASQSQLDTAAALLAPCRFDTACDRSVQGTMNQMAGDLEHRLWFDNARLDDLSSYATGAWLSDRPCTVKGQKDCIWPNRAMLALLSRAGNSAPAKRNVIQLADYLSSRNG
|
| Protein name |
Orphan protein
|
| Main knot |
31 (50%)
|
| Global pLDDT |
87.1
|
| Species |
Methylomonas sp
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
207
|
| ESM generation time |
2023-06-26: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
90.9 | 2-115 | 114 | 1-1, 116-207 | 1 | 92 |
|
Model Sequence |
MIDIHATKKLYAKLPAPISAPQSETTPLTPTLSLGEREQNPLSGWHANLLILQRRNCVLLVHDATRFPLFVKGLLKADFANFDHLFADALMNTLLKLGASQSQLDTAAALLAPCRFDTACDRSVQGTMNQMAGDLEHRLWFDNARLDDLSSYATGAWLSDRPCTVKGQKDCIWPNRAMLALLSRAGNSAPAKRNVIQLADYLSSRNG
|
| Domain |
Bacteria
|
| Family |
Methylococcaceae
|
| Species (Full Name) |
Methylomonas sp. DH-1
|
| Gene |
AYM39_18490
|
| PDB structures (whole Protein) |
-
|
A0A172UDD3