| Protein name |
GAF domain-containing protein
|
| Main knot |
41 (90%)
|
| Global pLDDT |
80.99
|
| Species |
Chryseobacterium sp
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A177LPP5
|
| PDB structures |
-
|
| Structure in AlphaLasso |
 A0A177LPP5: L0
|
| Model length |
734
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
86.3 | 19-419 | 401 | 1-18, 420-734 | 18 | 315 |
|
Model Sequence |
MYPKEYINCDQEPIHICGEVQKYGYLLGTKDSKITFYSENILDLFSQDSRLVLGKDIKVLFDELQLDINWDNFSNDHELAIQHITFKEEEYTLSIHTNKGFTFYEIEKVIPNHKINKEYKAIQNILRMSDGDNVWKLLLDEVQKIIDFDRAMIYQFLYDGSGEVIEESVKPGLESYLHLHYPESDIPAQARALYLKNTVRITSHVSGETYPIYGVQKENIDLTYSVTRSSSPVHRQYLKNAGVESSFSASIIVNGKLWGLVACQNAEPKHLDLQSRLLVETLTRTSANAFASYLSLQTLEDYQRINLNNISLRKNLLNEEDFGKSLENNIEDIMNTCDAEGMIIKINNEILTHGNVPNNSDIEKIIQWSKDNNQDFEENIFISNTFCKTSGLELDNSEVSCGIIISVLGNNTSDMLIWMRKEQGQKIKWAGNPEKETISEIKDGVEIIKFSPRKSFEVWKEYVKDTALPWKTREIESAKWITSVILKASHTKSSQISDLNEQLKELNEELDSFSYTISHDLNTPLTVIKLNAQLMKRMQQPDEKSQKFLDTIIGQVDSMSDMIKNVLELSKIKKSEIELKKIEVDSLINKLAEDSKISFDSPHTEIIIENTPEVMGDPTMVYQVFGNVIGNAIKYSSRSSKPKVKIIGEVYENGVTYKISDNGIGIDKEDAGKMFKIFSRMSNAKAFHGNGVGLSIVHHLMEKMGGEISYESESGIGTTFILKFQKPDYDFSIS
|
| Domain |
Bacteria
|
| Family |
Weeksellaceae
|
| Species (Full Name) |
Chryseobacterium sp. FP211-J200
|
| Gene |
AXA65_01935
|
| PFAM codes |
PF00360, PF00512, PF01590, PF02518, PF08446
|
| InterPro codes |
 IPR001294, IPR003018, IPR003594, IPR003661, IPR005467, IPR013515, IPR013654, IPR016132, IPR029016, IPR035965, IPR036097, IPR036890, IPR043150
|
| PDB structures (whole Protein) |
-
|
A0A177LPP5