A0A1B1AX89 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Integral membrane protein
Main knot	5₂ (51%)
Global pLDDT	83.65
Species	Streptomyces griseochromogenes
UniProt	A0A1B1AX89
Structure Prediction Model	AlphaFold v4: A0A1B1AX89
PDB structures	-
Model length	347
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					85.0	21-258	238	1-20, 259-347	20	89

Model Sequence

MTEAAVRIDGNTLRLRGGVAVRFVRTLRLPETGTHPLPPGLGEFPVRRVADHADRVPEEWRARGGVMLPVYLREAMWLSFAGTAEPAALQVGVGKVCAVSGKPWRDRLARAPQNYVVLPRQPWLDGINSGTGTVRQFVAVPLGLGATVEGQVTGEEVWGGVQLQSFPLKEAALAEWRRRERERRARTGPTGPFGGYGGPVAMAAPAPGGPPPPAAAPPRRAAAMGLGVGGSMRQEVYEDDRPLTDWSEKPAARVFVHLVTPPEWRRITGEAPPPSPVDRAAYTSAGLPWYDYDDEDAEDLAPTDTLEAVKPVGDWLGDDLEPWQQPSADQVVPLKDAQGRPVEDGEW

Comments

ESM1

Categories voted by users:

Information

Protein name	Integral membrane protein
Main knot	5₂ (65%)
Global pLDDT	71.43
Species	Streptomyces griseochromogenes
UniProt	A0A1B1AX89
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	347
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					84.3	23-275	253	1-22, 276-347	22	72

Model Sequence

Comments

Domain	Bacteria
Family	Streptomycetaceae
Species (Full Name)	Streptomyces griseochromogenes
Gene	AVL59_17295
PDB structures (whole Protein)	-

A0A1B1AX89F1

AF4

Model Sequence

ESM1

Model Sequence