A0A1B7UDA5 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	rRNA methyltransferase
Main knot	3₁ (92%)
Global pLDDT	89.96
Species	Mycobacterium sp
UniProt	A0A1B7UDA5
Structure Prediction Model	AlphaFold v4: A0A1B7UDA5
PDB structures	-
Model length	285
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					95.7	203-248	46	1-202, 249-285	202	37

Model Sequence

MSHRTEALNVQAVDDSDDPRLDDFRDLNSVDRRPDLPSGKGLVIAEGVLVVQRMLASRFRPHALLGTDRRLAELEDDLAGSAVPFYLASADVMARVVGFHLNRGVLAVARRAPERGVAEVIAGARTVAVLEGVNDHENLGSIFRNAAGLGVDAVVFGGGCADPLYRRAVRVSMGHALLVPYARATCWPDELATLRENGFRLLAMTPQGTACALPEAMTAARDERVAVLVGAEGPGLTPATLRCSDARVRIPMSRGTDSLNVATAAALAFYERARSATRGGDGQSD

Comments

ESM1

Categories voted by users:

Information

Protein name	rRNA methyltransferase
Main knot	3₁ (84%)
Global pLDDT	90.25
Species	Mycobacterium sp
UniProt	A0A1B7UDA5
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	285
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					93.7	46-146	101	1-45, 147-285	45	139

Model Sequence

Comments

Domain	Bacteria
Family	Mycobacteriaceae
Species (Full Name)	Mycobacterium sp. 852002-40037_SCH5390672
Gene	A5782_20045
PFAM codes	PF00588
InterPro codes	IPR001537, IPR029026, IPR029028, IPR029064
PDB structures (whole Protein)	-

A0A1B7UDA5F1

AF4

Model Sequence

ESM1

Model Sequence