Protein name |
Pyridoxamine 5'-phosphate oxidase family protein
|
Main knot |
31 (80%)
|
Global pLDDT |
92.12
|
Species |
Polaribacter vadi
|
UniProt | |
Structure Prediction Model |
AlphaFold v4:
![]() |
PDB structures |
-
|
Model length |
173
|
AlphaFold deposition date |
2022-06-01
|
AlphaKnot deposition date |
2023-01-27
|
Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
---|---|---|---|---|---|---|---|---|---|---|---|
![]() |
96.0 | 6-156 | 151 | 1-5, 157-173 | 5 | 17 |
![]() |
Model Sequence |
MGYNISGIAINKNYENDFESLQNQLGWNLEKVAEIDFETASANWTDDKICNVHFTKTGTLIFIGMENCEQSFNLKNDHVLTFALSETSMVFNINYSEKGVEKRSIIEVNDERVEDSGEALAIEKDSEDTSEIIWNQIEVLLGKRFFDIELEEKATQYRFKPVIDLKKWWKFWK
|
Protein name |
Pyridoxamine 5'-phosphate oxidase family protein
|
Main knot |
31 (81%)
|
Global pLDDT |
78.12
|
Species |
Polaribacter vadi
|
UniProt | |
Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
PDB structures |
-
|
Model length |
173
|
ESM generation time |
2023-06-24: download the generated 3D model
|
AlphaKnot deposition date |
2023-06-28
|
Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
---|---|---|---|---|---|---|---|---|---|---|---|
![]() |
84.7 | 7-156 | 150 | 1-6, 157-173 | 6 | 17 |
![]() |
Model Sequence |
MGYNISGIAINKNYENDFESLQNQLGWNLEKVAEIDFETASANWTDDKICNVHFTKTGTLIFIGMENCEQSFNLKNDHVLTFALSETSMVFNINYSEKGVEKRSIIEVNDERVEDSGEALAIEKDSEDTSEIIWNQIEVLLGKRFFDIELEEKATQYRFKPVIDLKKWWKFWK
|
Domain |
Bacteria
|
Family |
Flavobacteriaceae
|
Species (Full Name) |
Polaribacter vadi
|
Gene |
LPB3_03245
|
PDB structures (whole Protein) |
-
|