A0A1C0ZTK9 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Transcriptional regulator
Main knot	8₁ (50%)
Global pLDDT	84.77
Species	Paenibacillus pectinilyticus
UniProt	A0A1C0ZTK9
Structure Prediction Model	AlphaFold v4: A0A1C0ZTK9
PDB structures	-
Model length	273
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					85.4	26-254	229	1-25, 255-273	25	19

Model Sequence

MSFIVLERFIEDGSYHKLKYTTKILDNIKDLIRHDLNSRGIRHETWDEFGVVGKFKMVNRYKYDYQSLNEYLFDLGILPLVASIKQAILTETEIKTLKDSNSNKQDFSLQFFTKNIGNPIIIKGNALNNEMTLSEQVYLWKENSQLKNVLNKRWDKILDELTDWLKKQGVKDIKFKYGSLALKEKVYSSPLEVFNLLGKEVIIRSSIPELDRVEEFAARGFLNISELKEYRQIIGVKEQFILMEVDKEEKCRKWLDRRREKLSGLSMSQDFNF

Comments

ESM1

Categories voted by users:

Information

Protein name	Transcriptional regulator
Main knot	8₁ (59%)
Global pLDDT	86.37
Species	Paenibacillus pectinilyticus
UniProt	A0A1C0ZTK9
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	273
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					87.0	26-240	215	1-25, 241-273	25	33

Model Sequence

Comments

Domain	Bacteria
Family	Paenibacillaceae
Species (Full Name)	Paenibacillus pectinilyticus
Gene	A8709_07070
PDB structures (whole Protein)	-

A0A1C0ZTK9F1

AF4

Model Sequence

ESM1

Model Sequence