A0A1C1C789 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot	5₂ (69%)
Global pLDDT	83.78
Species	Cladophialophora carrionii
UniProt	A0A1C1C789
Structure Prediction Model	AlphaFold v4: A0A1C1C789
PDB structures	-
Model length	349
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					82.6	13-263	251	1-12, 264-349	12	86

Model Sequence

MAEDAASGGWSTIESDEVSMHQSPAHFTAWTTADMLPPTAQGVFTSLIEQLGVKRVQCEELISLDADSIRALSPVYGVIFLFKWIGSSSESRAAPQDGTYDTTAVDEEGLFFAAQTIQNACGTQAVLSVVLNNDTSSASAGPDAIDIGPSLQEFKDFTTGFDAGLRGESLSNSEMIRTVHNSFAKSSPFVDESARDPGAASEDVFHFIGYTCHRGKLYELDGLQPYPISHGACTPDEFPDKIIPVLQRRIERYPPGEVHFNLMAICEDLRVKAYSFKDNELLEREQRKRAQWDFENALRRHNFVGFTAEVLKGVVQMKIEEGTYETWIDEAKKTTEKRLRERRKHADAS

Comments

ESM1

Categories voted by users:

Information

Protein name	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot	5₂ (78%)
Global pLDDT	82.46
Species	Cladophialophora carrionii
UniProt	A0A1C1C789
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	349
ESM generation time	2023-06-22: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					45.4	13-263	251	1-12, 264-349	12	86

Model Sequence

Comments

Domain	Eukaryota
Family	Herpotrichiellaceae
Species (Full Name)	Cladophialophora carrionii
Gene	uch2 CLCR_11210
PFAM codes	PF01088, PF18031
InterPro codes	IPR001578, IPR017390, IPR036959, IPR038765, IPR041507
PDB structures (whole Protein)	-

A0A1C1C789F1

AF4

Model Sequence

ESM1

Model Sequence