A0A1C4H1L0F1

RNA methyltransferase, TrmH family
AF4
Categories voted by users:
Information
Protein name
RNA methyltransferase, TrmH family
Main knot
31 (78%)
Global pLDDT
82.93
Species
Bifidobacterium commune
UniProt
Structure Prediction Model
AlphaFold v4:  A0A1C4H1L0
PDB structures
-
Model length
343
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
89.3 251-309 59 1-250, 310-343 250 34
Model Sequence
MPFNQHIIDSTKSERVRRVAELEKTKARKKSGKFLIEGPQSVREIVRWMPEAVVDCYVQTGDQQHEMISPVVENIADEADKGGLYIHRVTGEVMHRMSTDAQGILAVGDLEVMQRCMDEAFTGNQTGTGNDTQAVHNLLTRGTEIRSDAEMNHISDGTLTTRAQETFHSGPVSNTVAAFWQIRDPGNAGTVIRTADAAGARAVIFVDDCVDRFNPKVIRSSAGSLFHVPVVTMGTEEFFIWALGQHNDLIAADVYGTQQNRPESLIEVIRSYYEDAKRGRRTNASHTILFGNEARGLPDWVLERVNSIVSIPLYGKAESLNLATSTSVLLFTLAMARDIEQGV
Comments
ESM1
Categories voted by users:
Information
Protein name
RNA methyltransferase, TrmH family
Main knot
31 (75%)
Global pLDDT
86.74
Species
Bifidobacterium commune
UniProt
Structure Prediction Model
PDB structures
-
Model length
343
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
95.2 251-308 58 1-250, 309-343 250 35
Model Sequence
MPFNQHIIDSTKSERVRRVAELEKTKARKKSGKFLIEGPQSVREIVRWMPEAVVDCYVQTGDQQHEMISPVVENIADEADKGGLYIHRVTGEVMHRMSTDAQGILAVGDLEVMQRCMDEAFTGNQTGTGNDTQAVHNLLTRGTEIRSDAEMNHISDGTLTTRAQETFHSGPVSNTVAAFWQIRDPGNAGTVIRTADAAGARAVIFVDDCVDRFNPKVIRSSAGSLFHVPVVTMGTEEFFIWALGQHNDLIAADVYGTQQNRPESLIEVIRSYYEDAKRGRRTNASHTILFGNEARGLPDWVLERVNSIVSIPLYGKAESLNLATSTSVLLFTLAMARDIEQGV
Comments
Domain Bacteria
Family Bifidobacteriaceae
Species (Full Name) Bifidobacterium commune
Gene GA0061077_0356
PFAM codes  PF00588
InterPro codes  IPR001537,  IPR029026,  IPR029028,  IPR029064
PDB structures (whole Protein) -
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