| Protein name |
AraC family transcriptional regulator
|
| Main knot |
31 (46%)
|
| Global pLDDT |
96.1
|
| Species |
uncultured Clostridium
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A1C5XL11
|
| PDB structures |
-
|
| Structure in AlphaLasso |
 A0A1C5XL11: L+1N
|
| Model length |
174
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
97.4 | 2-102 | 101 | 1-1, 103-174 | 1 | 72 |
|
Model Sequence |
MELGLTIPLQTYLKIKQLEDRTQKDLFFCWELHRIQLQSRDTLVAVNSSNRLAVVMSGMDGAAWRDFPLVFTQGLRQVLGAEGYRSCQIEAYLSQAGPLKLTRTHGRRSVAGLNRMDDCLWSVPVLVDETRLFQQVHCMEANRQRCRMAGHEGYQEPSYCWEIDMDARQLLHIC
|
| Protein name |
AraC family transcriptional regulator
|
| Main knot |
31 (48%)
|
| Global pLDDT |
76.83
|
| Species |
uncultured Clostridium
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Structure in AlphaLasso |
A0A1C5XL11: L+1N
|
| Model length |
174
|
| ESM generation time |
2023-06-25: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
85.8 | 3-108 | 106 | 1-2, 109-174 | 2 | 66 |
|
Model Sequence |
MELGLTIPLQTYLKIKQLEDRTQKDLFFCWELHRIQLQSRDTLVAVNSSNRLAVVMSGMDGAAWRDFPLVFTQGLRQVLGAEGYRSCQIEAYLSQAGPLKLTRTHGRRSVAGLNRMDDCLWSVPVLVDETRLFQQVHCMEANRQRCRMAGHEGYQEPSYCWEIDMDARQLLHIC
|
| Domain |
Bacteria
|
| Family |
Clostridiaceae
|
| Species (Full Name) |
uncultured Clostridium sp
|
| Gene |
SAMEA3545303_04432
|
| PDB structures (whole Protein) |
-
|
A0A1C5XL11