A0A1C6MAQ9 | AlphaKnot 2.0

AF4

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Information

Protein name	Ca(2+)/H(+) antiporter
Main knot	3₁ (51%)
Global pLDDT	86.16
Species	Variovorax sp
UniProt	A0A1C6MAQ9
Structure Prediction Model	AlphaFold v4: A0A1C6MAQ9
PDB structures	-
Model length	368
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					84.1	45-295	251	1-44, 296-368	44	73

Model Sequence

MFNWLMIFVPISIAMEHFYPHQHLFVFLTASFAILPLAGWMSRATEHLAERIGEGIGGLLNATFGNAAELIIAFAALRAGLHDVVKASIAGSIIGNILLVLGAAMFAGGLGHSEQTYNAAGTRSQATLLTLSAIALVLPAAYSAAVGRGITQGMPGLSAGLAHNVVLLSVSIAVVLLAVYGLFLVFSLITHKALFVGSVAHVAAGDTPPPWSVQKSLLILAAATAAIAWVSEILVGAIEPTAHEFGLSRVFVGVFVVAILGNAAEHASAITAAMKNRMDLSLAIAIGSSVQVALFVAPVLVLASLWVGPGPMDLVFPSGLVATVLLSVLITGQVAGDGRSDWLRGVLLLAVYLIFGLAFFFVPGVPGH

Comments

ESM1

Categories voted by users:

Information

Protein name	Ca(2+)/H(+) antiporter
Main knot	3₁ (49%)
Global pLDDT	92.22
Species	Variovorax sp
UniProt	A0A1C6MAQ9
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	368
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					96.6	45-295	251	1-44, 296-368	44	73

Model Sequence

Comments

Domain	Bacteria
Family	Comamonadaceae
Species (Full Name)	Variovorax sp. HW608
Gene	VAR608DRAFT_1036
PFAM codes	PF01699
InterPro codes	IPR004713, IPR004798, IPR004837, IPR044880
PDB structures (whole Protein)	-

A0A1C6MAQ9F1

AF4

Model Sequence

ESM1

Model Sequence