A0A1D6DUP5 | AlphaKnot 2.0

AF4

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Information

Protein name	Invertase cell wall4
Main knot	5₂ (71%)
Global pLDDT	84.01
Species	Maize
UniProt	A0A1D6DUP5
Structure Prediction Model	AlphaFold v4: A0A1D6DUP5
PDB structures	-
Model length	548
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					86.1	14-519	506	1-13, 520-548	13	29

Model Sequence

MARLPLAACAVAAAFYLCLHLASSSSSAPRLAPAPSDGGRRAGRTAYHFQPAKNWQNGPMYYNGMYHLFYQYNPHGALWGVGNLSWGHSVSGDLVNWAALDTALDPTSPFDANGCWSGSATILPGGTPAILYTGIDANGEQVQNVAFPRDPADPLLRRWDKPGYNPVIPLPADVPGDKFRDPSTAWLGRDGLWRVAVSAEVRGVASTLVYRSADFLRWERAPAAAPLHASRAAGMVECPDLFPVKEEGDDGDGQGLDASASGAGLRHVLKLSVMDTLQDYYMVGRYDDAADAFVPAEPERGDDVRGWRRLDYGHTFPRKLWLDEDGKQLRQWPVEEIETLRRKRVVLRRGTALATGGMNEIVGVAGSQADVEVAFKVSSLAGAEALDPNWLLDPQKLCGEKGASVPGGVGPFGLIVMASSDLREHTAVFFRAFRYHGRSSTRAGVYKPPYGGFVDVDVEEHETINLRTLIDHSVVESFGADGRMCITARVYPEHAETSNNHMFVFNNGTGTVEVYKLEAWELAAATVNSVGGNDSLVISKSNDQSESY

Comments

AF1-Unsure

Categories voted by users:

Information

Protein name	Invertase cell wall4
Main knot	5₂ (71%)
Knot fingerprint	K 5₂ 3₁
Global pLDDT	84.01
Species	Maize
UniProt	A0A1D6DUP5
Structure Prediction Model	AlphaFold v1: A0A1D6DUP5
PDB structures	-
Model length	548
AlphaFold deposition date	2021-07-01
AlphaKnot deposition date	2021-12-18

Knot map

Knot cutoff: 48%

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					85.6	11-520	510	1-10, 521-548	10	28		Knot
					85.7	10-491	482	1-9, 492-548	9	57		Slipknot

Model Sequence

Comments

Domain	Eukaryota
Family	Poaceae
Species (Full Name)	Zea mays
PFAM codes	PF00251, PF08244
InterPro codes	IPR001362, IPR013148, IPR013189, IPR013320, IPR023296
PDB structures (whole Protein)	-

A0A1D6DUP5F1

AF4

Model Sequence

AF1-Unsure

Model Sequence