A0A1D6ECH4F1

Putative metal-nicotianamine transporter YSL6
AF4
Categories voted by users:
Information
Protein name
Putative metal-nicotianamine transporter YSL6
Main knot
52 (61%)
Global pLDDT
78.53
Species
Maize
UniProt
Structure Prediction Model
AlphaFold v4:  A0A1D6ECH4
PDB structures
-
Model length
792
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
87.7 119-647 529 1-118, 648-792 118 145
Model Sequence
MTPAETSPPAPPPRASHPVSSPLLLQDPTTQATCPWREQLTVRGVAVAAALGALLCVVIHRLNLTVGVIPALNVASGLLAFFLAAAWRAAAGWLGFGRGPPFTRQENTVIQTCAIACAGLAFSGCSASYIFAMDRKTYELVGPDYPGNRAEDVKDPSLGWMISFLFLIALVGPFSIVLLRKVMVIDYKLAFPGGTATALMINSLHGKTDGDLAGKKLHCLVKYMGISFVWSFFKWFFSGVGDSCGFDNFPTFGLEAFKSTFYFDFSPSYVGFGFISPHIVNCSVFLGSVISWGFLWPFISAQAGHWYPDNLGNSDFRGLYGYKVFIAISIILGDGLYNLVKIFIVIARELCSMQSKQHELPVQALEDDGSCEQLADEKLQTEIFLKDSISPWFAASGYIVLAAISTASVPAIFPQLKWYLVLLCYFFAPVVAFCNSYGMGLTNLNLAPTYGKIALFALASLVGSDGGGVIAGLAACGIVMSVACSTADLMQDLKSGYLTLSSPRSMFTAQLIGIALGCVIAPLTLWLFWTAFDIGDPDGEYKAPFAIMFREMAILGMEGFSALPLHCLDICYAAFFLALATSLLKDVAPANVSRFIPIPIAMAAPFYVGAYFGVDMFIGTAILYAWQKLNREQADGYAVAVASGLICGDGIWSIPSALLSILGAVPPICMSFEASSAPSHASPSRVSHIIWSTGASGSSRRSAAAMEMLSMLKVGYTILRSETPATDLVNTFMDWAARRSLMLLAIFLPPYYIYKLTTSAFAAAVPEDVAGKVVLITGAASGIGQIFSCHFP
Comments
AF1-Knot
Categories voted by users:
Information
Protein name
Putative metal-nicotianamine transporter YSL6
Main knot
52 (64%)
Knot fingerprint
K 52 31 31 52 31
Global pLDDT
78.53
Species
Maize
UniProt
Structure Prediction Model
AlphaFold v1:  A0A1D6ECH4
PDB structures
-
Model length
792
AlphaFold deposition date
2021-07-01
AlphaKnot deposition date
2021-12-18
Knot map

Knot cutoff: 48%


Help Knotting data interpretation
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Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
87.8 16-653 638 1-15, 654-792 15 139 Knot
87.4 114-607 494 1-113, 608-792 113 185 Slipknot
Model Sequence
MTPAETSPPAPPPRASHPVSSPLLLQDPTTQATCPWREQLTVRGVAVAAALGALLCVVIHRLNLTVGVIPALNVASGLLAFFLAAAWRAAAGWLGFGRGPPFTRQENTVIQTCAIACAGLAFSGCSASYIFAMDRKTYELVGPDYPGNRAEDVKDPSLGWMISFLFLIALVGPFSIVLLRKVMVIDYKLAFPGGTATALMINSLHGKTDGDLAGKKLHCLVKYMGISFVWSFFKWFFSGVGDSCGFDNFPTFGLEAFKSTFYFDFSPSYVGFGFISPHIVNCSVFLGSVISWGFLWPFISAQAGHWYPDNLGNSDFRGLYGYKVFIAISIILGDGLYNLVKIFIVIARELCSMQSKQHELPVQALEDDGSCEQLADEKLQTEIFLKDSISPWFAASGYIVLAAISTASVPAIFPQLKWYLVLLCYFFAPVVAFCNSYGMGLTNLNLAPTYGKIALFALASLVGSDGGGVIAGLAACGIVMSVACSTADLMQDLKSGYLTLSSPRSMFTAQLIGIALGCVIAPLTLWLFWTAFDIGDPDGEYKAPFAIMFREMAILGMEGFSALPLHCLDICYAAFFLALATSLLKDVAPANVSRFIPIPIAMAAPFYVGAYFGVDMFIGTAILYAWQKLNREQADGYAVAVASGLICGDGIWSIPSALLSILGAVPPICMSFEASSAPSHASPSRVSHIIWSTGASGSSRRSAAAMEMLSMLKVGYTILRSETPATDLVNTFMDWAARRSLMLLAIFLPPYYIYKLTTSAFAAAVPEDVAGKVVLITGAASGIGQIFSCHFP
Comments
Domain Eukaryota
Family Poaceae
Species (Full Name) Zea mays
PFAM codes  PF03169
InterPro codes  IPR004813,  IPR045035
PDB structures (whole Protein) -
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