A0A1D6HET2F1

Metal-nicotianamine transporter YSL2
AF4
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Information
Protein name
Metal-nicotianamine transporter YSL2
Main knot
52 (52%)
Global pLDDT
80.04
Species
Maize
UniProt
Structure Prediction Model
AlphaFold v4:  A0A1D6HET2
PDB structures
-
Structure in AlphaLasso
  A0A1D6HET2: LS4++-+N
Model length
706
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
85.1 155-677 523 1-154, 678-706 154 29
Model Sequence
MPRTTTPQGLLIYNGLVESEALIDSSSCSSRTAMEINPADEIDKCEAGGGAEPQPADPEPDAAAAVEQQQPWREQLTARGLVAAALIGSMYTVVVMKLNLTTGFVPTMNVSAALLAFLALRGWTGALSRLGVAGARPFTRQENTVVQTCAVACYSLALCGFGSFMLGLNRRTYEAAGVNTPGNVPGSVKEPGFGWIAGFLVASSFGGLLTLIPLRKALVIDYKLTYPSGTATAVLINGFHTPQGDKNAEKQVRAFLKYFGISFLWSFFQWFYTGGNACGFAQFPTFGLKAWKHSFFFDFSMTYVGAGMICPHLVNLSALLGAVLSWGILWPLISRRKGYWYPADVPESSMTSLYGYKSFVCIALIMGDGIYHLVKVLGVTAKSLHERSKLRRSNNRVADEDNAAAIDSLRRDEVFNRDSIPAWLAYAGYAVTSAVAAVAIPAMFRQVRWYYVVAAYALAPVLGFSNSYGAGLTDINMGYSYGQLALFVLAAWAGRDDGVVAGLVGCGLVKQLVLISADLMHDFKTAHLTLTSPRSMLAAQAVGAAMGCVVTPLTFLLFYRAFDVGNPDGYWKAPFALIYRNMALLGAQGFSALPTHCLPLSAGFFALAVLANVMKDVLPPRYARYVPLPTAMAVPFLVGASFAIDMVVGTVVVFAWHWIDGNETTLLVPAVASGLICGDGVWTFPSSLLSLAKIKPPICLKFTPGS
Comments
AF1-Knot
Categories voted by users:
Information
Protein name
Metal-nicotianamine transporter YSL2
Main knot
52 (54%)
Knot fingerprint
K 52 31 52 52 31
Global pLDDT
80.04
Species
Maize
UniProt
Structure Prediction Model
AlphaFold v1:  A0A1D6HET2
PDB structures
-
Structure in AlphaLasso
  A0A1D6HET2: LS4++-+N
Model length
706
AlphaFold deposition date
2021-07-01
AlphaKnot deposition date
2021-12-18
Knot map

Knot cutoff: 48%


Help Knotting data interpretation
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Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
85.4 6-687 682 1-5, 688-706 5 19 Knot
85.2 142-637 496 1-141, 638-706 141 69 Slipknot
Model Sequence
MPRTTTPQGLLIYNGLVESEALIDSSSCSSRTAMEINPADEIDKCEAGGGAEPQPADPEPDAAAAVEQQQPWREQLTARGLVAAALIGSMYTVVVMKLNLTTGFVPTMNVSAALLAFLALRGWTGALSRLGVAGARPFTRQENTVVQTCAVACYSLALCGFGSFMLGLNRRTYEAAGVNTPGNVPGSVKEPGFGWIAGFLVASSFGGLLTLIPLRKALVIDYKLTYPSGTATAVLINGFHTPQGDKNAEKQVRAFLKYFGISFLWSFFQWFYTGGNACGFAQFPTFGLKAWKHSFFFDFSMTYVGAGMICPHLVNLSALLGAVLSWGILWPLISRRKGYWYPADVPESSMTSLYGYKSFVCIALIMGDGIYHLVKVLGVTAKSLHERSKLRRSNNRVADEDNAAAIDSLRRDEVFNRDSIPAWLAYAGYAVTSAVAAVAIPAMFRQVRWYYVVAAYALAPVLGFSNSYGAGLTDINMGYSYGQLALFVLAAWAGRDDGVVAGLVGCGLVKQLVLISADLMHDFKTAHLTLTSPRSMLAAQAVGAAMGCVVTPLTFLLFYRAFDVGNPDGYWKAPFALIYRNMALLGAQGFSALPTHCLPLSAGFFALAVLANVMKDVLPPRYARYVPLPTAMAVPFLVGASFAIDMVVGTVVVFAWHWIDGNETTLLVPAVASGLICGDGVWTFPSSLLSLAKIKPPICLKFTPGS
Comments
Domain Eukaryota
Family Poaceae
Species (Full Name) Zea mays
PFAM codes  PF03169
InterPro codes  IPR004813,  IPR045035
PDB structures (whole Protein) -
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