A0A1D6KI03F1

Oligopeptide transporter 5
AF4
Categories voted by users:
Information
Protein name
Oligopeptide transporter 5
Main knot
52 (60%)
Global pLDDT
87.9
Species
Maize
UniProt
Structure Prediction Model
AlphaFold v4:  A0A1D6KI03
PDB structures
-
Model length
755
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
90.9 141-696 556 1-140, 697-755 140 59
Model Sequence
MEPVEPQQQVELNRLNASSRPGTNGGKKEEEVDDCPIEEVRLTVPITDDPALPALTFRTWFLGLLSCALLAFSNQFFGYRQNPLYISSLSVQIVVLPLGKLMAACLPTKAVRVMGRSFSLNPGPFNLKEHVLITIFANTGSNSVYAVGIITIVKAFYHREIHPLAAMLLTQTTQLMGYGWAGLFRKFLVDSPYMWWPANLVQVSLFRALHERETRRPRGGTTRLQFFLTVLATSFAYYIVPNYLFPTISTVSVACLVWRRSVTAQQIGSGVYGLGVGAFGLDWATVAGFLGTPLSTPAFAIANIMAGFFLIVYVIVPFAYWSDAYGARRFPIISSHVFMANGSRYDVNRVLGAGTFQFSQAGYDGAGQIHLSIFFAFSYGLSFATLAATLSHVALYHGRSIWEQTRATVRAAGGDVHARLMRRNYAAVPQWWFQVLLLLVLGLSLFTCEGFGRQLQLPYWGVLLAAGLAFFFTLPIGIITATTNQQPGLNVVTELIIGYLYPGRPLANVAFKTYGYISMSQAIMFLQDFKLGHYMKIPPRSMFAVQLVGTVLASSVYFATSWWLLESVPGICDPARLPEGSPWTCPGDDVFFNASIIWGVVGPLRMFGRLGLYAKMNYFFLAGALAPVPFWALARAFPDSAWAPWLRLVNMPVLLGATGMMPPARSVNYLMWGAVGLAFNYVVYRRYKAWWARHNYVLSAGLDAGVAFMGILSYAVLQSRGVNGIDWWGLQVDDHCALARCPTAPGVRAPGCPVH
Comments
AF1-Knot
Categories voted by users:
Information
Protein name
Oligopeptide transporter 5
Main knot
52 (58%)
Knot fingerprint
K 52 31 52 52 31
Global pLDDT
87.9
Species
Maize
UniProt
Structure Prediction Model
AlphaFold v1:  A0A1D6KI03
PDB structures
-
Model length
755
AlphaFold deposition date
2021-07-01
AlphaKnot deposition date
2021-12-18
Knot map

Knot cutoff: 48%


Help Knotting data interpretation
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
91.0 38-706 669 1-37, 707-755 37 49 Knot
91.0 134-659 526 1-133, 660-755 133 96 Slipknot
Model Sequence
MEPVEPQQQVELNRLNASSRPGTNGGKKEEEVDDCPIEEVRLTVPITDDPALPALTFRTWFLGLLSCALLAFSNQFFGYRQNPLYISSLSVQIVVLPLGKLMAACLPTKAVRVMGRSFSLNPGPFNLKEHVLITIFANTGSNSVYAVGIITIVKAFYHREIHPLAAMLLTQTTQLMGYGWAGLFRKFLVDSPYMWWPANLVQVSLFRALHERETRRPRGGTTRLQFFLTVLATSFAYYIVPNYLFPTISTVSVACLVWRRSVTAQQIGSGVYGLGVGAFGLDWATVAGFLGTPLSTPAFAIANIMAGFFLIVYVIVPFAYWSDAYGARRFPIISSHVFMANGSRYDVNRVLGAGTFQFSQAGYDGAGQIHLSIFFAFSYGLSFATLAATLSHVALYHGRSIWEQTRATVRAAGGDVHARLMRRNYAAVPQWWFQVLLLLVLGLSLFTCEGFGRQLQLPYWGVLLAAGLAFFFTLPIGIITATTNQQPGLNVVTELIIGYLYPGRPLANVAFKTYGYISMSQAIMFLQDFKLGHYMKIPPRSMFAVQLVGTVLASSVYFATSWWLLESVPGICDPARLPEGSPWTCPGDDVFFNASIIWGVVGPLRMFGRLGLYAKMNYFFLAGALAPVPFWALARAFPDSAWAPWLRLVNMPVLLGATGMMPPARSVNYLMWGAVGLAFNYVVYRRYKAWWARHNYVLSAGLDAGVAFMGILSYAVLQSRGVNGIDWWGLQVDDHCALARCPTAPGVRAPGCPVH
Comments
Domain Eukaryota
Family Poaceae
Species (Full Name) Zea mays
PFAM codes  PF03169
InterPro codes  IPR004648,  IPR004813
PDB structures (whole Protein) -
How to cite