A0A1D6Q7K9F1

Oligopeptide transporter 4
AF4
Categories voted by users:
Information
Protein name
Oligopeptide transporter 4
Main knot
52 (53%)
Global pLDDT
82.88
Species
Maize
UniProt
Structure Prediction Model
AlphaFold v4:  A0A1D6Q7K9
PDB structures
-
Structure in AlphaLasso
  A0A1D6Q7K9: LS3++-N
Model length
769
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
85.0 151-712 562 1-150, 713-769 150 57
Model Sequence
MGEIGTDHRGLAEAEAGVGGKEEGIVLGGHEEEEETSPVEQVRLTVPSTDDPSLPVWTFRMWSIGLLSCALMSFLNQFFSYRTEPLIVTQITVQVASLPLGHFMARALPRARFRAPALLGGGEWSLNPGPFNVKEHVLISIFANAGFAFGNGSAYAVAIIDIIRAFYHRHISFFTAWLLVVTTQVLGYGWAGLLRKYVVQPAHMWWPGTLVQVSLFRALHEKDESAKASRQISRSKFFLVVLACSFAWYAVPGYLFPTLTSISWVCWVFSRSVTAQQLGSGMSGLGLGAFTLDWSTVSSFLFSPLISPFFATANIFFGYVFFVYVIMPAAYWGFDLYSAKTFPIFSSHLFMSNGSSYDVQSIVNNRFELDLDAYGKNGKVSLSVFFALSYGFSFATIAATITHVGLFYGKEIYYRFRSSQKEKPDIHTKLMERYSEIPAWWFYSLMALSIVVSLLLCTVLKREVQLPWWGLIFACGMAFVFTLPISIITATTNQASNNRLASHTPGLNVITEYAMGLIMPGSPIAVVCFKVYGYMSMAQAVAFLSDFKLGHYMKIPPKSMFLVQFVGTIVAGTVNIGTAWWLLGSIDGICSDSLPPDSPWTCPNDRVFFDASVIWGLVGPRRIFGPDGNYGALNWFFLIGAAGPVIVYALHRTFPGQRWIPLINLPVLFGATAYMPPATAVNYNSWLLVGTVFNFFVFRYRKKWWTRYNYILSAALDAGVAFMGVVLYFSLTMQNKSIDWWGTAGEHCPLARCPTAKGVDLGDGVCPVF
Comments
AF1-Knot
Categories voted by users:
Information
Protein name
Oligopeptide transporter 4
Main knot
52 (57%)
Knot fingerprint
K 52 31 52 31
Global pLDDT
82.88
Species
Maize
UniProt
Structure Prediction Model
AlphaFold v1:  A0A1D6Q7K9
PDB structures
-
Structure in AlphaLasso
  A0A1D6Q7K9: LS3++-N
Model length
769
AlphaFold deposition date
2021-07-01
AlphaKnot deposition date
2021-12-18
Knot map

Knot cutoff: 48%


Help Knotting data interpretation
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
85.1 74-718 645 1-73, 719-769 73 51 Knot
84.8 136-676 541 1-135, 677-769 135 93 Slipknot
Model Sequence
MGEIGTDHRGLAEAEAGVGGKEEGIVLGGHEEEEETSPVEQVRLTVPSTDDPSLPVWTFRMWSIGLLSCALMSFLNQFFSYRTEPLIVTQITVQVASLPLGHFMARALPRARFRAPALLGGGEWSLNPGPFNVKEHVLISIFANAGFAFGNGSAYAVAIIDIIRAFYHRHISFFTAWLLVVTTQVLGYGWAGLLRKYVVQPAHMWWPGTLVQVSLFRALHEKDESAKASRQISRSKFFLVVLACSFAWYAVPGYLFPTLTSISWVCWVFSRSVTAQQLGSGMSGLGLGAFTLDWSTVSSFLFSPLISPFFATANIFFGYVFFVYVIMPAAYWGFDLYSAKTFPIFSSHLFMSNGSSYDVQSIVNNRFELDLDAYGKNGKVSLSVFFALSYGFSFATIAATITHVGLFYGKEIYYRFRSSQKEKPDIHTKLMERYSEIPAWWFYSLMALSIVVSLLLCTVLKREVQLPWWGLIFACGMAFVFTLPISIITATTNQASNNRLASHTPGLNVITEYAMGLIMPGSPIAVVCFKVYGYMSMAQAVAFLSDFKLGHYMKIPPKSMFLVQFVGTIVAGTVNIGTAWWLLGSIDGICSDSLPPDSPWTCPNDRVFFDASVIWGLVGPRRIFGPDGNYGALNWFFLIGAAGPVIVYALHRTFPGQRWIPLINLPVLFGATAYMPPATAVNYNSWLLVGTVFNFFVFRYRKKWWTRYNYILSAALDAGVAFMGVVLYFSLTMQNKSIDWWGTAGEHCPLARCPTAKGVDLGDGVCPVF
Comments
Domain Eukaryota
Family Poaceae
Species (Full Name) Zea mays
PFAM codes  PF03169
InterPro codes  IPR004648,  IPR004813
PDB structures (whole Protein) -
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