A0A1D8PNY8F1

Ubiquitin carboxyl-terminal hydrolase
AF4
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase
Main knot
52 (64%)
Global pLDDT
90.01
Species
Canal
UniProt
Structure Prediction Model
AlphaFold v4:  A0A1D8PNY8
PDB structures
-
Model length
313
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
90.6 8-231 224 1-7, 232-313 7 82
Model Sequence
MSQSGWNTIDSDAGVFTELVEKLGVENIEINDLYSIDSDTLRALQPIHGLIFLFKYSKLDREFATSNQPITGEYEGNYLDKGIFFAHQTIQNACATQAVLNILFNLQDVSLGEELNNFKSFVTGFDSEMIGETISNSDLIRSIHNSFSAPHSFVDEDKPPPPPDRDDKDDGLFHFVGYIFKQGKIYELDGLKQYPISHGECSGQDEFIQKLPTIVQERISKYGNELRFSLLAVTNNKLEQAQAMGDQEEIASQLHKRELWKKENELRKHDYTGLIVQLLKNISKEKSDKEWEDFLQKGRNKTQQLIAQSIKKT
Comments
AF1-Knot
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase
Main knot
52 (71%)
Knot fingerprint
K 52 31 31
Global pLDDT
90.01
Species
Canal
UniProt
Structure Prediction Model
AlphaFold v1:  A0A1D8PNY8
PDB structures
-
Model length
313
AlphaFold deposition date
2021-07-01
AlphaKnot deposition date
2021-12-18
Knot map

Knot cutoff: 48%


Help Knotting data interpretation
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
90.6 9-234 226 1-8, 235-313 8 79 Knot
88.8 8-176 169 1-7, 177-313 7 137 Slipknot
Model Sequence
MSQSGWNTIDSDAGVFTELVEKLGVENIEINDLYSIDSDTLRALQPIHGLIFLFKYSKLDREFATSNQPITGEYEGNYLDKGIFFAHQTIQNACATQAVLNILFNLQDVSLGEELNNFKSFVTGFDSEMIGETISNSDLIRSIHNSFSAPHSFVDEDKPPPPPDRDDKDDGLFHFVGYIFKQGKIYELDGLKQYPISHGECSGQDEFIQKLPTIVQERISKYGNELRFSLLAVTNNKLEQAQAMGDQEEIASQLHKRELWKKENELRKHDYTGLIVQLLKNISKEKSDKEWEDFLQKGRNKTQQLIAQSIKKT
Comments
ESM1
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase
Main knot
52 (69%)
Global pLDDT
87.72
Species
Canal
UniProt
Structure Prediction Model
PDB structures
-
Model length
313
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
90.2 8-231 224 1-7, 232-313 7 82
Model Sequence
MSQSGWNTIDSDAGVFTELVEKLGVENIEINDLYSIDSDTLRALQPIHGLIFLFKYSKLDREFATSNQPITGEYEGNYLDKGIFFAHQTIQNACATQAVLNILFNLQDVSLGEELNNFKSFVTGFDSEMIGETISNSDLIRSIHNSFSAPHSFVDEDKPPPPPDRDDKDDGLFHFVGYIFKQGKIYELDGLKQYPISHGECSGQDEFIQKLPTIVQERISKYGNELRFSLLAVTNNKLEQAQAMGDQEEIASQLHKRELWKKENELRKHDYTGLIVQLLKNISKEKSDKEWEDFLQKGRNKTQQLIAQSIKKT
Comments
Domain Eukaryota
Family Debaryomycetaceae
Species (Full Name) Candida albicans
PFAM codes  PF01088,  PF18031
InterPro codes  IPR001578,  IPR017390,  IPR036959,  IPR038765,  IPR041507
PDB structures (whole Protein) -
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