| Protein name |
Alpha-E domain-containing protein
|
| Main knot |
61 (44%)
|
| Global pLDDT |
92.9
|
| Species |
Alphaproteobacteria bacterium
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A1F3A7Y8
|
| PDB structures |
-
|
| Model length |
263
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
93.5 | 63-252 | 190 | 1-62, 253-263 | 62 | 11 |
|
Model Sequence |
MSDPFPAVAEVSAAGETADLFVDIRATVGVRVVNLVWRHLATLDGALPWAWAAVKPLYLRGMVDTAAARFRSGMTLPRLGSLAGEEPASVDAVLASYDHSNTINLLALGALLAWLRGETGAAGTAEQGPRLPAPDVALPPLASEADVPPETWALVLRLNRFGDRPRPLILASMYRHLAHAPAFLRRIEDVLAPVQADGSLGRAIAANRASAHVATMRLARAVSARPPPLADQIETSVAAFVDHAIGKMATIGRAIRVARRTLP
|
| Protein name |
Alpha-E domain-containing protein
|
| Main knot |
61 (51%)
|
| Global pLDDT |
90.3
|
| Species |
Alphaproteobacteria bacterium
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
263
|
| ESM generation time |
2023-06-23: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
93.3 | 62-251 | 190 | 1-61, 252-263 | 61 | 12 |
|
Model Sequence |
MSDPFPAVAEVSAAGETADLFVDIRATVGVRVVNLVWRHLATLDGALPWAWAAVKPLYLRGMVDTAAARFRSGMTLPRLGSLAGEEPASVDAVLASYDHSNTINLLALGALLAWLRGETGAAGTAEQGPRLPAPDVALPPLASEADVPPETWALVLRLNRFGDRPRPLILASMYRHLAHAPAFLRRIEDVLAPVQADGSLGRAIAANRASAHVATMRLARAVSARPPPLADQIETSVAAFVDHAIGKMATIGRAIRVARRTLP
|
| Domain |
Bacteria
|
| Family |
unclassified Alphaproteobacteria
|
| Species (Full Name) |
Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_66_14
|
| Gene |
A3D94_06735
|
| PDB structures (whole Protein) |
-
|
A0A1F3A7Y8