| Protein name |
Secreted protein
|
| Main knot |
31 (95%)
|
| Global pLDDT |
76.35
|
| Species |
Deltaproteobacteria bacterium
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A1F9A7C2
|
| PDB structures |
-
|
| Structure in AlphaLasso |
 A0A1F9A7C2: L0
|
| Model length |
270
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
73.3 | 86-219 | 134 | 1-85, 220-270 | 85 | 51 |
|
Model Sequence |
MRYLVIVIIAAMMMAASAPAYSHGGSRLEGEVSIEVTSESGSTLLFIPHKDFWEGGTHVVKRYLEARRGENYGIVIHNMTPERIGVVIAVDGRNIISGKKSDLKNNEAMYIVNSYDYGEYDGWRTAGDKVHKFYFTDMADSYAMRTFSDSTAMGVIAVAIYREKERPQPLYEQKRLDNIYPAPSAEGSMKGKMGAARDESAGTGFGDEQYSPTIRVAFEPENTPVQKTLFKYEWREVLCRKGILSCREEARNRLWDEDAYAPYPPGYLRN
|
| Protein name |
Secreted protein
|
| Main knot |
52 (58%)
|
| Global pLDDT |
78.13
|
| Species |
Deltaproteobacteria bacterium
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Structure in AlphaLasso |
A0A1F9A7C2: L0
|
| Model length |
270
|
| ESM generation time |
2023-06-26: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
58.8 | 8-220 | 213 | 1-7, 221-270 | 7 | 50 |
|
Model Sequence |
MRYLVIVIIAAMMMAASAPAYSHGGSRLEGEVSIEVTSESGSTLLFIPHKDFWEGGTHVVKRYLEARRGENYGIVIHNMTPERIGVVIAVDGRNIISGKKSDLKNNEAMYIVNSYDYGEYDGWRTAGDKVHKFYFTDMADSYAMRTFSDSTAMGVIAVAIYREKERPQPLYEQKRLDNIYPAPSAEGSMKGKMGAARDESAGTGFGDEQYSPTIRVAFEPENTPVQKTLFKYEWREVLCRKGILSCREEARNRLWDEDAYAPYPPGYLRN
|
| Domain |
Bacteria
|
| Family |
unclassified Deltaproteobacteria
|
| Species (Full Name) |
Deltaproteobacteria bacterium RBG_13_52_11
|
| Gene |
A2Y65_06125
|
| PDB structures (whole Protein) |
-
|
A0A1F9A7C2