A0A1G3KVB6 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	RNA methyltransferase
Main knot	3₁ (75%)
Global pLDDT	94.69
Species	Sphingopyxis sp
UniProt	A0A1G3KVB6
Structure Prediction Model	AlphaFold v4: A0A1G3KVB6
PDB structures	-
Model length	268
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					95.0	196-238	43	1-195, 239-268	195	30

Model Sequence

MRRSTIESLSNPLIKRMRLLREKRHRRAEGLFLAEGLRIATEAREAGILPQWLFLGPEGDAHPLAAALVADTLAAGGEVIDTTAAILSKLSGKDNPQTVVGIYAEPETSLADLDRDAAPIWLVAERLRDPGNLGTMLRTGDAVGAGGLILLDESTDPYAVEAVRASMGAIFTQKLVVARWEEFLPWLRQGAGQLVATWLGDDTEDYQAVRYAAPTFILTGNESQGMPPEYAAAADVRVKMPMMGKADSLNAAVATAVMAYEVLNQRRG

Comments

ESM1

Categories voted by users:

Information

Protein name	RNA methyltransferase
Main knot	3₁ (77%)
Global pLDDT	95.9
Species	Sphingopyxis sp
UniProt	A0A1G3KVB6
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	268
ESM generation time	2023-06-22: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					97.4	35-135	101	1-34, 136-268	34	133

Model Sequence

Comments

Domain	Bacteria
Family	Sphingomonadaceae
Species (Full Name)	Sphingopyxis sp. RIFCSPHIGHO2_12_FULL_65_19
Gene	A3E77_16975
PFAM codes	PF00588
InterPro codes	IPR001537, IPR013123, IPR029026, IPR029028, IPR029064
PDB structures (whole Protein)	-

A0A1G3KVB6F1

AF4

Model Sequence

ESM1

Model Sequence