A0A1G4BSK1 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	18S rRNA aminocarboxypropyltransferase (EC 2.5.1.-)
Main knot	3₁ (98%)
Global pLDDT	70.83
Species	Colletotrichum orchidophilum
UniProt	A0A1G4BSK1
Structure Prediction Model	AlphaFold v4: A0A1G4BSK1
PDB structures	-
Model length	390
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					91.4	80-127	48	1-79, 128-390	79	263

Model Sequence

MVRHKKDNFSSRGRKLHLGPPRQRQPRDGDDTDGPSIRPTFKAACWDLGHCDPKRCSGKKLIRMGMMRDLHVGQRHNGVIITPNGKHTVSPADRDLMDQYGAAVVECSWARMKDVQWNKVGGKCERLLPYLVAANTVNYGKPWKLNCVEALAAAFYICGHPEWAEQVLAPFSYGEAFLEINGSLLKKYAASEDEKGVKKVQEEWLDRLDKEYADSREDADADDMWKGGNTNRRAIRDSDDEEEDDEDDESGDESGEGDSVDGIYLGKKPAKDQEEEEDDKDPYAISDDSNDDAAMEEIRRKVLASKTFSNPAAEEKKKPESIARPQNLKPDSDVEPDSDNGEDDDDFDNIINATPVTDKIGLAKLEKERSQATTTSRTFSSNTVSAPKRW

Comments

ESM1

Categories voted by users:

Information

Protein name	18S rRNA aminocarboxypropyltransferase (EC 2.5.1.-)
Main knot	3₁ (91%)
Global pLDDT	68.6
Species	Colletotrichum orchidophilum
UniProt	A0A1G4BSK1
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	390
ESM generation time	2023-06-27: download the generated 3D model
AlphaKnot deposition date	2023-06-28

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					60.2	81-140	60	1-80, 141-390	80	250

Model Sequence

Comments

Domain	Eukaryota
Family	Glomerellaceae
Species (Full Name)	Colletotrichum orchidophilum
Gene	TSR3 CORC01_00251
PFAM codes	PF04034, PF04068
InterPro codes	IPR007177, IPR007209, IPR022968
PDB structures (whole Protein)	-

A0A1G4BSK1F1

AF4

Model Sequence

ESM1

Model Sequence