| Protein name |
Type I restriction enzyme R protein
|
| Main knot |
83 (46%)
|
| Global pLDDT |
92.06
|
| Species |
Lachnospira pectinoschiza
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v6:
A0A1G9VCB2
|
| PDB structures |
-
|
| Model length |
458
|
| AlphaFold deposition date |
2026-06-01
|
| AlphaKnot deposition date |
2026-07-09
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
92.4 | 18-453 | 436 | 1-17, 454-458 | 17 | 5 |
|
Knot | ||||
|
|
92.1 | 57-411 | 355 | 1-56, 412-458 | 56 | 47 | Knot |
Model Sequence |
MKNLSYIANEINKGKDLDENLLLYLKSASSLYSTLGAIKLSMNYYTLVDILLEEDIDDTFVSNFENVKTVLEDILKGETEDADSKLSEIRNKLIEKMEKITNIVDRLRIYEYVLNRIEYKYKEAELDKEYYNTYLTNDVMHYILKDKDNLVINTKIAEIIGQLPMRMSKGKFYDHIEDAFSLHHGAMKKTIDDFYYSLSTTAMLKDLGDISEFGDVAVAIERLESASYSKLSKDEFDQLRKAFDLASERINALADSYVLLTQVINDALTISLTSSTSLGLNEELDLAKNIILETGKAYITRVGMDEIAENFVNFEGKQEKLLENISSSDFIIDYVNNELKDKLDVESLVGYEKLLQVTKLQSGSDFVSLFKVENEEEIPEDSYADNMAEKLCKELDESFKGMESMVKRAIMASVISNLPVFFNDTKEIQDYINSALMACSDEAEMKACVEIIKAVVKG
|
| Protein name |
Type I restriction enzyme R protein
|
| Main knot |
83 (45%)
|
| Global pLDDT |
92.16
|
| Species |
Lachnospira pectinoschiza
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
A0A1G9VCB2
|
| PDB structures |
-
|
| Model length |
458
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
92.3 | 39-449 | 411 | 1-38, 450-458 | 38 | 9 |
|
Model Sequence |
MKNLSYIANEINKGKDLDENLLLYLKSASSLYSTLGAIKLSMNYYTLVDILLEEDIDDTFVSNFENVKTVLEDILKGETEDADSKLSEIRNKLIEKMEKITNIVDRLRIYEYVLNRIEYKYKEAELDKEYYNTYLTNDVMHYILKDKDNLVINTKIAEIIGQLPMRMSKGKFYDHIEDAFSLHHGAMKKTIDDFYYSLSTTAMLKDLGDISEFGDVAVAIERLESASYSKLSKDEFDQLRKAFDLASERINALADSYVLLTQVINDALTISLTSSTSLGLNEELDLAKNIILETGKAYITRVGMDEIAENFVNFEGKQEKLLENISSSDFIIDYVNNELKDKLDVESLVGYEKLLQVTKLQSGSDFVSLFKVENEEEIPEDSYADNMAEKLCKELDESFKGMESMVKRAIMASVISNLPVFFNDTKEIQDYINSALMACSDEAEMKACVEIIKAVVKG
|
| Domain |
Bacteria
|
| Family |
Lachnospiraceae
|
| Species (Full Name) |
Lachnospira pectinoschiza
|
| Gene |
SAMN05216544_0901
|
| PDB structures (whole Protein) |
-
|