| Protein name |
Halocarboxylic acid dehydrogenase DehI
|
| Main knot |
61 (52%)
|
| Global pLDDT |
94.41
|
| Species |
Litchfieldia salsa
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v6:
A0A1H0Q5M4
|
| PDB structures |
-
|
| Model length |
280
|
| AlphaFold deposition date |
2026-06-01
|
| AlphaKnot deposition date |
2026-07-09
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
96.2 | 57-276 | 220 | 1-56, 277-280 | 56 | 4 |
|
Knot |
Model Sequence |
MFKPQFGIPEIFESQAHGMLETIYEDIKFVLKVPIVNFVFRTLAYYETFLQLSWNQVRPNLLTRNLEFSASQLRYPKISFQPSEIKWNQMYSDETVQTIKKTLFIFNYVNPKLLVITTSWQEALGYRPINGGATNEGFIQPGVIPDLPKPELIHIPSASIRTKNLLSDIIDKKKSYDAASDYRALAYFPGFLTRAWPSIKEYIGTSEYTLLGEEIKNKARKLVHEKSPYPVTLSSEFLQTFYSPKEVAGIMGIISMFTTHISDLIIEGECLRRTIDGEPS
|
| Protein name |
Halocarboxylic acid dehydrogenase DehI
|
| Main knot |
61 (50%)
|
| Global pLDDT |
94.44
|
| Species |
Litchfieldia salsa
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
A0A1H0Q5M4
|
| PDB structures |
-
|
| Model length |
280
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
96.2 | 61-267 | 207 | 1-60, 268-280 | 60 | 13 |
|
Model Sequence |
MFKPQFGIPEIFESQAHGMLETIYEDIKFVLKVPIVNFVFRTLAYYETFLQLSWNQVRPNLLTRNLEFSASQLRYPKISFQPSEIKWNQMYSDETVQTIKKTLFIFNYVNPKLLVITTSWQEALGYRPINGGATNEGFIQPGVIPDLPKPELIHIPSASIRTKNLLSDIIDKKKSYDAASDYRALAYFPGFLTRAWPSIKEYIGTSEYTLLGEEIKNKARKLVHEKSPYPVTLSSEFLQTFYSPKEVAGIMGIISMFTTHISDLIIEGECLRRTIDGEPS
|
| Protein name |
Halocarboxylic acid dehydrogenase DehI
|
| Main knot |
61 (43%)
|
| Global pLDDT |
90.07
|
| Species |
Litchfieldia salsa
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
280
|
| ESM generation time |
2023-06-24: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
92.3 | 61-267 | 207 | 1-60, 268-280 | 60 | 13 |
|
Model Sequence |
MFKPQFGIPEIFESQAHGMLETIYEDIKFVLKVPIVNFVFRTLAYYETFLQLSWNQVRPNLLTRNLEFSASQLRYPKISFQPSEIKWNQMYSDETVQTIKKTLFIFNYVNPKLLVITTSWQEALGYRPINGGATNEGFIQPGVIPDLPKPELIHIPSASIRTKNLLSDIIDKKKSYDAASDYRALAYFPGFLTRAWPSIKEYIGTSEYTLLGEEIKNKARKLVHEKSPYPVTLSSEFLQTFYSPKEVAGIMGIISMFTTHISDLIIEGECLRRTIDGEPS
|