A0A1H0Q5M4 | AlphaKnot 2.0

AF4

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Information

Protein name	Halocarboxylic acid dehydrogenase DehI
Main knot	6₁ (50%)
Global pLDDT	94.44
Species	Litchfieldia salsa
UniProt	A0A1H0Q5M4
Structure Prediction Model	AlphaFold v4: A0A1H0Q5M4
PDB structures	-
Model length	280
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					96.2	61-267	207	1-60, 268-280	60	13

Model Sequence

MFKPQFGIPEIFESQAHGMLETIYEDIKFVLKVPIVNFVFRTLAYYETFLQLSWNQVRPNLLTRNLEFSASQLRYPKISFQPSEIKWNQMYSDETVQTIKKTLFIFNYVNPKLLVITTSWQEALGYRPINGGATNEGFIQPGVIPDLPKPELIHIPSASIRTKNLLSDIIDKKKSYDAASDYRALAYFPGFLTRAWPSIKEYIGTSEYTLLGEEIKNKARKLVHEKSPYPVTLSSEFLQTFYSPKEVAGIMGIISMFTTHISDLIIEGECLRRTIDGEPS

Comments

ESM1

Categories voted by users:

Information

Protein name	Halocarboxylic acid dehydrogenase DehI
Main knot	6₁ (43%)
Global pLDDT	90.07
Species	Litchfieldia salsa
UniProt	A0A1H0Q5M4
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	280
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					92.3	61-267	207	1-60, 268-280	60	13

Model Sequence

Comments

Domain	Bacteria
Family	Bacillaceae
Species (Full Name)	Litchfieldia salsa
Gene	SAMN05216565_101605
PFAM codes	PF10778
InterPro codes	IPR019714
PDB structures (whole Protein)	-

A0A1H0Q5M4F1

AF4

Model Sequence

ESM1

Model Sequence