A0A1H6CBN7 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Integral membrane protein
Main knot	5₂ (53%)
Global pLDDT	82.88
Species	Streptomyces yanglinensis
UniProt	A0A1H6CBN7
Structure Prediction Model	AlphaFold v4: A0A1H6CBN7
PDB structures	-
Model length	359
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					82.7	20-271	252	1-19, 272-359	19	88

Model Sequence

MGGQVRVSQGALELPGGATVRFMRTLRLPETGTHPLPPGLGGFPLRRVADYPDRAPEQWLGHGGVLLPVYQREAMWLSFSASAPVALQVGVGKVCAVSGRPWSDRLAQDPQNYLVLPRQPWLDGINSGRGTIRQFVAVPLGLGATVEGQVSGAEVWGGVQLQVFELRTSVLARWHAEQRARAVPEREVAGWGGVGGAQPGGAPGPPAVPMAAHAPESPAAEPGGPRSPAARRTAAAMGLGAGGLMRQEVYRDVRPLDDWRRKPSGRVFVHLATAPQWREITGEPAPASPVDRAAYTAAGLPWFAYYDADADDVAAAGPLEQVRPAGDWLGDDEQPWVAPDSQQITPLGDAPGQVVDGDW

Comments

ESM1

Categories voted by users:

Information

Protein name	Integral membrane protein
Main knot	5₂ (66%)
Global pLDDT	73.83
Species	Streptomyces yanglinensis
UniProt	A0A1H6CBN7
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	359
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					84.4	22-286	265	1-21, 287-359	21	73

Model Sequence

Comments

Domain	Bacteria
Family	Streptomycetaceae
Species (Full Name)	Streptomyces yanglinensis
Gene	SAMN05216223_108265
PDB structures (whole Protein)	-

A0A1H6CBN7F1

AF4

Model Sequence

ESM1

Model Sequence