A0A1H8ZF23F1

TraB/GumN family protein
AF4
Categories voted by users:
Information
Protein name
TraB/GumN family protein
Main knot
52 (52%)
Global pLDDT
78.31
Species
Lewinella agarilytica
UniProt
Structure Prediction Model
AlphaFold v4:  A0A1H8ZF23
PDB structures
-
Model length
345
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
77.9 12-328 317 1-11, 329-345 11 17
Model Sequence
MRISFFSLLFVLLCISCSPKTATVAKAAEKAPQQTTSTAPAPAPPTTSAATAPILSGLAPGVNDTSLLWKISTPGIAQPSYLFGTIHIIPEEDYFLPNRVVAAINDSEELIFEIDPRDMQNPAKLMGLMTKINMRGDTSLEDLLPAEQYAEVEAYFTESGLPFFIFKRMKPLFLSAMVGQDMAAMAEGGGMEGGGMKSYEMELTKLAEAGSKEIGGLETMEFQLSLFDSIPYGAQATMLYQAIQSESAGKAGDAPNEMDELVSLYRRQAIAEMASTISDESAGVARFEELLLTKRNENWVPQIRDNINAANAGGKFYAVGAGHLGGARGVIALLRGAGITVEPVY
Comments
ESM1
Categories voted by users:
Information
Protein name
TraB/GumN family protein
Main knot
62 (30%)
Global pLDDT
84.35
Species
Lewinella agarilytica
UniProt
Structure Prediction Model
PDB structures
-
Model length
345
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
63.8 8-295 288 1-7, 296-345 7 50
Model Sequence
MRISFFSLLFVLLCISCSPKTATVAKAAEKAPQQTTSTAPAPAPPTTSAATAPILSGLAPGVNDTSLLWKISTPGIAQPSYLFGTIHIIPEEDYFLPNRVVAAINDSEELIFEIDPRDMQNPAKLMGLMTKINMRGDTSLEDLLPAEQYAEVEAYFTESGLPFFIFKRMKPLFLSAMVGQDMAAMAEGGGMEGGGMKSYEMELTKLAEAGSKEIGGLETMEFQLSLFDSIPYGAQATMLYQAIQSESAGKAGDAPNEMDELVSLYRRQAIAEMASTISDESAGVARFEELLLTKRNENWVPQIRDNINAANAGGKFYAVGAGHLGGARGVIALLRGAGITVEPVY
Comments
Domain Bacteria
Family Lewinellaceae
Species (Full Name) Lewinella agarilytica
Gene SAMN05444359_101301
PFAM codes  PF01963
InterPro codes  IPR002816
PDB structures (whole Protein) -
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