Protein name |
Outer membrane lipoprotein-sorting protein
|
Main knot |
41 (61%)
|
Global pLDDT |
79.57
|
Species |
Amycolatopsis marina
|
UniProt | |
Structure Prediction Model |
AlphaFold v4:
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PDB structures |
-
|
Model length |
347
|
AlphaFold deposition date |
2022-06-01
|
AlphaKnot deposition date |
2023-01-27
|
Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
---|---|---|---|---|---|---|---|---|---|---|---|
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82.9 | 21-221 | 201 | 1-20, 222-347 | 20 | 126 |
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Model Sequence |
MNPKKRAITVAVAGTAAGALGLGLVAMPAGAGDDPQLPAISAEELVESALRADTPELAGTVQADNNLGLPSIPGVPALDLDSAKVYSDGEGRSKLMLRQGGSDHTIVQNGATVWSYDSAANSATRMQLPEDEREAKSAEQAADPTAIAAQVLGAIRESSTVAVDGTATVADRAAYELVLTPKPDERTLLREVRVAVDSGTRLPLRLEVMVNGTTDPALSVGFSEISFGDQPEDLFRFTPPPGATVTEKSFEDDPKRQHADATPEDIRFVGEGWDTVIVTKFPNGAATFDDGDLDVRGLLDQIGRPVSGPFGSGHVVSTNAVNALVTDDGRVAAGAVPEQVLMEALTQ
|
Protein name |
Outer membrane lipoprotein-sorting protein
|
Main knot |
41 (70%)
|
Global pLDDT |
84.73
|
Species |
Amycolatopsis marina
|
UniProt | |
Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
PDB structures |
-
|
Model length |
347
|
ESM generation time |
2023-06-24: download the generated 3D model
|
AlphaKnot deposition date |
2023-06-28
|
Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
---|---|---|---|---|---|---|---|---|---|---|---|
![]() |
51.5 | 16-221 | 206 | 1-15, 222-347 | 15 | 126 |
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Model Sequence |
MNPKKRAITVAVAGTAAGALGLGLVAMPAGAGDDPQLPAISAEELVESALRADTPELAGTVQADNNLGLPSIPGVPALDLDSAKVYSDGEGRSKLMLRQGGSDHTIVQNGATVWSYDSAANSATRMQLPEDEREAKSAEQAADPTAIAAQVLGAIRESSTVAVDGTATVADRAAYELVLTPKPDERTLLREVRVAVDSGTRLPLRLEVMVNGTTDPALSVGFSEISFGDQPEDLFRFTPPPGATVTEKSFEDDPKRQHADATPEDIRFVGEGWDTVIVTKFPNGAATFDDGDLDVRGLLDQIGRPVSGPFGSGHVVSTNAVNALVTDDGRVAAGAVPEQVLMEALTQ
|
Domain |
Bacteria
|
Family |
Pseudonocardiaceae
|
Species (Full Name) |
Amycolatopsis marina
|
Gene |
SAMN05216266_12415
|
InterPro codes |
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PDB structures (whole Protein) |
-
|