A0A1I2PPU3F1

RNA methyltransferase, TrmH family
AF4
Categories voted by users:
Information
Protein name
RNA methyltransferase, TrmH family
Main knot
31 (75%)
Global pLDDT
93.51
Species
Ligilactobacillus ruminis
UniProt
Structure Prediction Model
AlphaFold v4:  A0A1I2PPU3
PDB structures
-
Model length
255
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
91.4 187-229 43 1-186, 230-255 186 26
Model Sequence
MDIITSSSNQRVKDWKKLSQKKARIKQGKYMLDGWHLVKEAILFDQPISEILVTQDFKHRNELEVPDNVEVIEISDNVAKHLSETPSPQGIFAVVNLPENADEKPKKATGAWLFLDGVQDPGNIGTMVRTADACGFSGVVFGEGCADMFQPKVVRAMQGSQFHLKLCSGNLIEWAKEFKQRKLPVFGSELNDQARSYDQVGRHSDFALVMGNEGNGMSEKLLKETSLNLYIPIKGHAESLNVAVAAGILMFGLME
Comments
ESM1
Categories voted by users:
Information
Protein name
RNA methyltransferase, TrmH family
Main knot
31 (75%)
Global pLDDT
95.87
Species
Ligilactobacillus ruminis
UniProt
Structure Prediction Model
PDB structures
-
Model length
255
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
97.3 32-232 201 1-31, 233-255 31 23
Model Sequence
MDIITSSSNQRVKDWKKLSQKKARIKQGKYMLDGWHLVKEAILFDQPISEILVTQDFKHRNELEVPDNVEVIEISDNVAKHLSETPSPQGIFAVVNLPENADEKPKKATGAWLFLDGVQDPGNIGTMVRTADACGFSGVVFGEGCADMFQPKVVRAMQGSQFHLKLCSGNLIEWAKEFKQRKLPVFGSELNDQARSYDQVGRHSDFALVMGNEGNGMSEKLLKETSLNLYIPIKGHAESLNVAVAAGILMFGLME
Comments
Domain Bacteria
Family Lactobacillaceae
Species (Full Name) Ligilactobacillus ruminis DSM 20403 = NBRC 102161
Gene SAMN02910432_00129
PFAM codes  PF00588,  PF08032
InterPro codes  IPR001537,  IPR013123,  IPR029026,  IPR029028,  IPR029064
PDB structures (whole Protein) -
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