A0A1J3EDH1F1

Oligopeptide transporter 3
AF6
Categories voted by users:
Information
Protein name
Oligopeptide transporter 3
Main knot
52 (57%)
Global pLDDT
81.63
Species
Alpine penny-cress
UniProt
Structure Prediction Model
AlphaFold v6:  A0A1J3EDH1
PDB structures
-
Structure in AlphaLasso
  A0A1J3EDH1: LS3++-N  LS2++C
Model length
775
AlphaFold deposition date
2026-06-01
AlphaKnot deposition date
2026-07-09
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
85.52 101-722 622 1-100, 723-775 100 53 Knot
Model Sequence
PILTVVVDLVSVLWLYINKTTQLCHVLERGRRRRSKRKKMDAEKANNGHISSTEQHERCPVEEVALVVPETDDPTLPVMTFRAWFLGLASCVLLIFLNTFFTYRTQPLTISAILMQIAVLPIGKFMARTLPTTSHKLMGKEFSLNPGPFNIKEHVIITIFANCGVAYGGGDAYSIGAITVMKAYYKQSLTFICGLFIVLTTQILGYGWAGILRRYLVDPVDMWWPSNLAQVSLFRALHEKEHKSKGLTRMQFFLLALGASFLYYALPGYLFPILTFFSWVCWAWPNSITAQQVGSGYHGLGVGAFTLDWAGISAYHGSPLVAPWSSILNVGVGFIMFIYIIVPLCYWKFDTFDARKFPIFSNQLFTSTGQKYDTTKILTPRFDLDINAYNNYGKLYLSPLFALSIGSGFARFTATLTHVALFNGRDIWRQTWSAVKTVKLDVHGKLMQSYKQVPEWWFYILLAASVAMSLLMSFVWKESVQLPWWGMLFAFALAFIVTLPIGVIQATTNQQPGYDIIGQFMIGYILPGKPIANLIFKIYGRISTVHALSFLADLKLGHYMKIPPRCMYTAQLVGTVVAGVVNLGVAWWMLESIQDICDIQGVHPNSPWTCPKYRVTFDASVIWGLIGPKRLFGAGGMYRNLVWLFLIGAVLPVPVWAMSKIFPNKKWIPLINIPVISYGFAGMPPATPTNIASWLVTGTIFNYFVFNYHKRWWQKYNYVLSAALDAGTAFMGVLLFFALQNAGHELKWWGTEVDHCPLATCPTAPGIRVKGCPVF
Comments
AF4
Categories voted by users:
Information
Protein name
Oligopeptide transporter 3
Main knot
52 (62%)
Global pLDDT
81.72
Species
Alpine penny-cress
UniProt
Structure Prediction Model
AlphaFold v4:  A0A1J3EDH1
PDB structures
-
Structure in AlphaLasso
  A0A1J3EDH1: LS3++-N  LS2++C
Model length
775
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
86.3 169-718 550 1-168, 719-775 168 57
Model Sequence
PILTVVVDLVSVLWLYINKTTQLCHVLERGRRRRSKRKKMDAEKANNGHISSTEQHERCPVEEVALVVPETDDPTLPVMTFRAWFLGLASCVLLIFLNTFFTYRTQPLTISAILMQIAVLPIGKFMARTLPTTSHKLMGKEFSLNPGPFNIKEHVIITIFANCGVAYGGGDAYSIGAITVMKAYYKQSLTFICGLFIVLTTQILGYGWAGILRRYLVDPVDMWWPSNLAQVSLFRALHEKEHKSKGLTRMQFFLLALGASFLYYALPGYLFPILTFFSWVCWAWPNSITAQQVGSGYHGLGVGAFTLDWAGISAYHGSPLVAPWSSILNVGVGFIMFIYIIVPLCYWKFDTFDARKFPIFSNQLFTSTGQKYDTTKILTPRFDLDINAYNNYGKLYLSPLFALSIGSGFARFTATLTHVALFNGRDIWRQTWSAVKTVKLDVHGKLMQSYKQVPEWWFYILLAASVAMSLLMSFVWKESVQLPWWGMLFAFALAFIVTLPIGVIQATTNQQPGYDIIGQFMIGYILPGKPIANLIFKIYGRISTVHALSFLADLKLGHYMKIPPRCMYTAQLVGTVVAGVVNLGVAWWMLESIQDICDIQGVHPNSPWTCPKYRVTFDASVIWGLIGPKRLFGAGGMYRNLVWLFLIGAVLPVPVWAMSKIFPNKKWIPLINIPVISYGFAGMPPATPTNIASWLVTGTIFNYFVFNYHKRWWQKYNYVLSAALDAGTAFMGVLLFFALQNAGHELKWWGTEVDHCPLATCPTAPGIRVKGCPVF
Comments
Domain Eukaryota
Family Brassicaceae
Species (Full Name) Noccaea caerulescens (Alpine penny-cress) (Thlaspi caerulescens)
Gene LC_TR19846_c0_g1_i1_g.66352
PFAM codes  PF03169
InterPro codes  IPR004648,  IPR004813
PDB structures (whole Protein) -
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