A0A1J3H3W1F1

Poly(A)-specific ribonuclease PARN-like
AF4
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Information
Protein name
Poly(A)-specific ribonuclease PARN-like
Main knot
31 (72%)
Global pLDDT
76.45
Species
Alpine penny-cress
UniProt
Structure Prediction Model
AlphaFold v4:  A0A1J3H3W1
PDB structures
-
Model length
619
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
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Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
81.5 29-429 401 1-28, 430-619 28 190
Model Sequence
FKMQRRFLSSVSASAGGSKTLNHRRWNVKQVKKRNFKSALDEIRTSIDSSDFIALSLQNTGSYAAAWHRVTAIDTPQTSYLKAKYAAERYQIFQFALCPFSLRGSKLTVHPYNFHLFPRDELKLGMPSYSFSCQASRLTAMAREGFDFNTCIYEGISYLSRTQESASKFLSGNPILADPIDVPSSPSTVADTVFVGRIRSRVKNWRQSCLDSSSKTGGDDDLVSSLRKLVLGSEQYGSRLCLTIDVCSERQAQLILEMLTEFCEDVVPLLVASKGRGTQAVRAVFMSSKEDKHLFVRELRDLETEENRRVRGFREVVDLISSSQKPLVSQNYLSDLTSIHAKFLGPLPSNVDEFSSSLSSAFPNVVDLSQFMKEISPLSNISNLPAAMSSLNRFFAPVDVEVANQGCPVKPDEGHQMHGQNAVMISQLFAKLCTIQKSDKSSVQSNEDLQGLASDEDANSVTACDENVKVWLKNSRRVSSENLVFVWGLGKKMTAAMLKNALQNSHAVFAGEFDVKYLDRSCAVVVFWESGSSETFLGAVNDEDEEKLGGGSLREMVAEGLRAAGYDTYKRACRLGFWEADLAESLEKTLESSDRDLDSDTKPSEIDWSSELAINFDEL
Comments
Domain Eukaryota
Family Brassicaceae
Species (Full Name) Noccaea caerulescens (Alpine penny-cress) (Thlaspi caerulescens)
Gene LE_TR16536_c0_g1_i1_g.52988
PFAM codes  PF04857
InterPro codes  IPR006941,  IPR012337,  IPR036397
PDB structures (whole Protein) -