A0A1J4NW94 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	RNA methyltransferase
Main knot	3₁ (89%)
Global pLDDT	92.27
Species	Streptomyces mangrovisoli
UniProt	A0A1J4NW94
Structure Prediction Model	AlphaFold v4: A0A1J4NW94
PDB structures	-
Model length	286
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					95.8	35-135	101	1-34, 136-286	34	151

Model Sequence

MSSVSPELISSRSARVVAARRLARRNFRGKDRLFLAEGPQAVREAAAHRVAAGATLVELFATVEAAERYADIVGAARAVGARVHLAAEEVIADVSTTVTPQGLVGVCRFLDTRFEDVLEARPRLVAVLANVRDPGNAGTVLRCADAAGAEAVVLTDASVDLYNPKAVRASVGSLFHLPVAVGVPVEEAVAGLRAAGVRILAADGAGDHDLDAELDGDTMGGPTAWVFGNEAWGLPEETRALADAVVRVPIHGKAESLNLATAAAVCLYASARAQRASGGCRSVTES

Comments

ESM1

Categories voted by users:

Information

Protein name	RNA methyltransferase
Main knot	3₁ (85%)
Global pLDDT	94.66
Species	Streptomyces mangrovisoli
UniProt	A0A1J4NW94
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	286
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					94.2	201-246	46	1-200, 247-286	200	40

Model Sequence

Comments

Domain	Bacteria
Family	Streptomycetaceae
Species (Full Name)	Streptomyces mangrovisoli
Gene	WN71_017400
PFAM codes	PF00588, PF08032
InterPro codes	IPR001537, IPR013123, IPR029026, IPR029028, IPR029064
PDB structures (whole Protein)	-

A0A1J4NW94F1

AF4

Model Sequence

ESM1

Model Sequence