A0A1J4W2U9 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Methionine adenosyltransferase
Main knot	3₁ (73%)
Global pLDDT	91.72
Species	Candidatus Pacearchaeota
UniProt	A0A1J4W2U9
Structure Prediction Model	AlphaFold v4: A0A1J4W2U9
PDB structures	-
Structure in AlphaLasso	A0A1J4W2U9: L₀
Model length	354
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					93.1	26-327	302	1-25, 328-354	25	27

Model Sequence

MVIQTDYLTERPFEIIEKKGMGHPDTLADNLAEFLSAKYSNYTRKKYGAILHHNFDKIALLGGSSFVTFGKGYLTSPIRVILNGRASTKFGQESISVDRLLIEWSKDFFRKCNCLYGVDIDKDLRFILELSNQSSPGKTHSGALVKKASRRFWFEPRSLEDLPELKRLFSNDTSLGVGYAPLSSLEKFVLNLEKYLNSQKIKKQFPWMGTDIKIMAVKIETEIQITLCIPQIADYVHSIEDYKRNVEECFNMVKALSLREGINLSNLAINTRDDYKVYEIYLTATGSSLESGDEGLVGRGNRITKLISPLNPYSMEGFCGKNPVYHIGKLYYLAAQILSEDIYIESFILGIKFF

Comments

ESM1

Categories voted by users:

Information

Protein name	Methionine adenosyltransferase
Main knot	3₁ (66%)
Global pLDDT	73.31
Species	Candidatus Pacearchaeota
UniProt	A0A1J4W2U9
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Structure in AlphaLasso	A0A1J4W2U9: L₀
Model length	354
ESM generation time	2023-06-26: download the generated 3D model
AlphaKnot deposition date	2023-06-28

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					75.0	26-326	301	1-25, 327-354	25	28

Model Sequence

Comments

Domain	Archaea
Family	Candidatus Pacearchaeota
Species (Full Name)	Candidatus Pacearchaeota archaeon CG1_02_35_32
Gene	AUJ63_05365
PFAM codes	PF01941
InterPro codes	IPR027790, IPR042543
PDB structures (whole Protein)	-

A0A1J4W2U9F1

AF4

Model Sequence

ESM1

Model Sequence