A0A1K1PLC8F1

TraB/GumN family protein
AF4
Categories voted by users:
Information
Protein name
TraB/GumN family protein
Main knot
31 (73%)
Global pLDDT
78.62
Species
Ruminococcus sp
UniProt
Structure Prediction Model
AlphaFold v4:  A0A1K1PLC8
PDB structures
-
Model length
369
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
71.4 22-215 194 1-21, 216-369 21 154
Model Sequence
MNRISIRQKMAALTAAVCMITTFAGCGGFSDSSSAGKAENSSSVTADSVEVVTLPPKDEDSKPEETASSDESGTESAPADDKFDTSDVPYTPAMWKVTSPSGNTMYMMGSMHALKEECVPLPDYVTERFGESEVLAVECDISDSTKNSAAALAVMNKITYPNGETIGEHLGEDLWEEVASYIEAYGGDPESLKSSQAWYIYSLLESMSLDSLGLDSTIGFDMQLLNMAKEQGKEIFEVESAEMQMDMLSGFDEKLIKAAIKGYSAENKDLIEEKLIEMYTAWKSGDTDSVSTEEGFDEELYTEEDKANIAEFNRILVTDRNVGMADKAMELLDSGKTVFYVVGLAHYLGDGGIIKLLEAEGCTVERVEV
Comments
ESM1
Categories voted by users:
Information
Protein name
TraB/GumN family protein
Main knot
41 (43%)
Global pLDDT
86.15
Species
Ruminococcus sp
UniProt
Structure Prediction Model
PDB structures
-
Model length
369
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
63.0 17-317 301 1-16, 318-369 16 52
Model Sequence
MNRISIRQKMAALTAAVCMITTFAGCGGFSDSSSAGKAENSSSVTADSVEVVTLPPKDEDSKPEETASSDESGTESAPADDKFDTSDVPYTPAMWKVTSPSGNTMYMMGSMHALKEECVPLPDYVTERFGESEVLAVECDISDSTKNSAAALAVMNKITYPNGETIGEHLGEDLWEEVASYIEAYGGDPESLKSSQAWYIYSLLESMSLDSLGLDSTIGFDMQLLNMAKEQGKEIFEVESAEMQMDMLSGFDEKLIKAAIKGYSAENKDLIEEKLIEMYTAWKSGDTDSVSTEEGFDEELYTEEDKANIAEFNRILVTDRNVGMADKAMELLDSGKTVFYVVGLAHYLGDGGIIKLLEAEGCTVERVEV
Comments
Domain Bacteria
Family Oscillospiraceae
Species (Full Name) Ruminococcus sp. YE71
Gene SAMN02910447_03046
PFAM codes  PF01963
InterPro codes  IPR002816
PDB structures (whole Protein) -
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