A0A1L3Q1H6 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Restriction endonuclease
Main knot	3₁ (73%)
Global pLDDT	76.98
Species	Methanohalophilus halophilus
UniProt	A0A1L3Q1H6
Structure Prediction Model	AlphaFold v4: A0A1L3Q1H6
PDB structures	-
Model length	353
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					89.4	174-324	151	1-173, 325-353	173	29

Model Sequence

MKQNVTQILKDIFTSSGYRIVDSSIADLIAEKDEKKMYIKFSNLLNTSYIEDFAYNIRDGAGLIVATGNASEEQIEFAKQKGVIVWDREELAYQIGNAVLADIEGESIELGEQSTPVEKATEEYIIADDKKKKPNMFAGTKKEVENRAIESKPKVKSDVETIPSVENKVIDLRSAPVNITGERAISIAKPHQRDVTTAALKFVPLWKYTYDIQAQRQFRSKIIDIEGDGEGYFNSMNEIFEDLDLPGINNQIEVEVSDYEVKAPIVTKEEATKAIYERIIDQYTRDVKFDNTIGEAIISEHKRISPSKKEIEMEIEIVYLPVWEAKGKRNSVEINATNGEVLLNPVDNDVEIM

Comments

ESM1

Categories voted by users:

Information

Protein name	Restriction endonuclease
Main knot	3₁ (82%)
Global pLDDT	83.28
Species	Methanohalophilus halophilus
UniProt	A0A1L3Q1H6
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	353
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					88.4	174-324	151	1-173, 325-353	173	29

Model Sequence

Comments

Domain	Archaea
Family	Methanosarcinaceae
Species (Full Name)	Methanohalophilus halophilus
Gene	BHR79_03970 EFE40_08145 SAMN04515625_1580
PDB structures (whole Protein)	-

A0A1L3Q1H6F1

AF4

Model Sequence

ESM1

Model Sequence