A0A1M4ULF9 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	LPP20 lipoprotein
Main knot	3₁ (64%)
Global pLDDT	86.38
Species	Schwartzia succinivorans
UniProt	A0A1M4ULF9
Structure Prediction Model	AlphaFold v4: A0A1M4ULF9
PDB structures	-
Model length	283
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					95.8	181-281	101	1-180, 282-283	180	2

Model Sequence

MKKIAALLIMCCMLVFGSVASAASGANFDANRVEADGYGVEPDNAGSAVQARLMARRAAIADAQRNLAEQIAGVQVNAETTVRDMQLASDVVTTRVSAVLKGAKVIEESYEDGAYHVVLALPVFGARNSLASVVLPSNPVKTEFPKALTPEPEENPYAPEYTPETTIEPTTHRVSGTYTGIIVDCTGLGLRTAMSPVIKTTSGEAIYGYKNLDSKKVIKNGMAGYAKNINGNVSRAGSNPLIVRAVGVDRYFNPVLSVADAKMVLEENELTHFLDNTAVVFIH

Comments

ESM1

Categories voted by users:

Information

Protein name	LPP20 lipoprotein
Main knot	3₁ (67%)
Global pLDDT	84.1
Species	Schwartzia succinivorans
UniProt	A0A1M4ULF9
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	283
ESM generation time	2023-06-22: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					89.1	181-281	101	1-180, 282-283	180	2

Model Sequence

Comments

Domain	Bacteria
Family	Selenomonadaceae
Species (Full Name)	Schwartzia succinivorans DSM 10502
Gene	SAMN02745190_00702
PFAM codes	PF02169
InterPro codes	IPR024952, IPR038180
PDB structures (whole Protein)	-

A0A1M4ULF9F1

AF4

Model Sequence

ESM1

Model Sequence