| Protein name |
GAF sensor signal transduction histidine kinase
|
| Main knot |
62 (90%)
|
| Global pLDDT |
78.66
|
| Species |
Bacteroides faecichinchillae
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A1M4V2D1
|
| PDB structures |
-
|
| Model length |
931
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
81.0 | 228-681 | 454 | 1-227, 682-931 | 227 | 250 |
|
Model Sequence |
MQTSNERYRKMSSLAQIGWWEADFVAGHYLCSDFLCDLLDLEGDTISFQDFQKMIREDYREQVIREFQANKSIHKNFYEQTFPIYSKYGEVWLHTRLAEREKGTGTNGGDKSFGVIQRVESLESIDKKGTLCRVNNLIRQQNSISRSLLCFLQDEEVESCIMKILTDILEIYRGGRVYIFEYDDTNSHHSCTYEVVSEGISPEKEYLKSIPSNQTKWWTEQILSGKPIILNSLRQLPEEAVDEYNILTKQGICSLMITPLMASDHIWGYLGIDLVGSYREWSNEDYQWFASLANIVSICMELRKAKDNITREQSFLRNLFSYMPMGYVRLSIICDENDVPCDYRITDANEISSKIFGISSEKYIGLQASEIYANHSQKLDDLLKILESKTHKEFDEYFPRTGIYTHWIVYSPEKNELVGLFLDSTEAVKANRALDRSEKLFKNIFANIPAGVEIYDKDGNLLDMNNKDVEIFGLNDKTDALGVNFFDNPNVPQDIRERVRNEDLVEFRLNYSFDQVGEYYHTERFNVIDLYTKVSKIYDNDGNFNGYILISIDNTERMDAMKRIRDFENFFLLISDYAKVGYAKLNLIDRKGYAIKQWYKNMGEDDDIPLSEVVGVYNKMHPEDRKRILDFYEEVKKGTAKNFKEEMRVRRPGTKDKWNWVRMNVVVTTYKPEENEIEIIGINYDITELKETEKELIQARDKAETMDRLKSAFLANMSHEIRTPLNAIVGFSDLLVDAEDLDERKEYIKIVRENNDLLLQLISDILDLSKIEAGTFDFTNTDVDVNMMCEDIVLSMQMKVKGDVQLIFDSNLPHYHIISDRNRLHQVISNFVNNAIKFTSEGSICVGYELKGNELEFYVKDTGVGIDKQHQNAVFERFVKLDSFVHGTGLGLSICQSIVEQLGGRIGVDSELGKGSRFWFTHPYLMDSEMV
|
| Domain |
Bacteria
|
| Family |
Bacteroidaceae
|
| Species (Full Name) |
Bacteroides faecichinchillae
|
| Gene |
SAMN05444349_10469
|
| PFAM codes |
PF00512, PF01590, PF02518, PF13426
|
| InterPro codes |
 IPR000014, IPR000700, IPR001610, IPR003018, IPR003594, IPR003661, IPR004358, IPR005467, IPR029016, IPR035965, IPR036097, IPR036890
|
| PDB structures (whole Protein) |
-
|
A0A1M4V2D1