A0A1M5AR06 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	PRiA4b ORF-3-like protein
Main knot	3₁ (44%)
Global pLDDT	92.3
Species	Thermoanaerobacter uzonensis
UniProt	A0A1M5AR06
Structure Prediction Model	AlphaFold v4: A0A1M5AR06
PDB structures	-
Structure in AlphaLasso	A0A1M5AR06: L_+1N
Model length	384
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					94.1	3-105	103	1-2, 106-384	2	279

Model Sequence

MLIQCTKKLLDVLERKPIPYEEENLLFCWHANFITLNRKKTVVLVNDKNRYVVVLYGLKTNDFKRLDEIILNAIRLTLLDECIDEDIVDEYLRQSGEIVYGKTKNSSYVGKLNTACNIVPYYEELLLGDTIYQTFVSKIASRYLVGKQEGEGYISPSEEMFKDLGIFAKRPIFKCKAVELKVTLKMENHNIWRRIVVPLNTTFTQFHKVLQAAFGWLDYHLYEFFIYGDEMQDISFINHPSYNKARYKPVVNLVGDEEAFDYPNDDDIEMRLEKGIKLSEYIPQCKRLLYVYDFGDNWRHYIEVERVIEDYDKNYAICVDGEGNAPPEDVGGEYGYDKFLEIISDKNNPEYESTLAWGEYQGYKDFNIREVNKNIKFVYDSFLL

Comments

ESM1

Categories voted by users:

Information

Protein name	PRiA4b ORF-3-like protein
Main knot	3₁ (44%)
Global pLDDT	89.35
Species	Thermoanaerobacter uzonensis
UniProt	A0A1M5AR06
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Structure in AlphaLasso	A0A1M5AR06: L_+1N
Model length	384
ESM generation time	2023-06-26: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					94.8	2-101	100	1-1, 102-384	1	283

Model Sequence

Comments

Domain	Bacteria
Family	Thermoanaerobacteraceae
Species (Full Name)	Thermoanaerobacter uzonensis DSM 18761
Gene	SAMN02745195_02375
PFAM codes	PF07929
InterPro codes	IPR012912, IPR024047
PDB structures (whole Protein)	-

A0A1M5AR06F1

AF4

Model Sequence

ESM1

Model Sequence