| Protein name |
Recombination-associated protein RdgC
|
| Main knot |
81 (57%)
|
| Global pLDDT |
91.52
|
| Species |
Planococcus lenghuensis
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A1Q2L4I7
|
| PDB structures |
-
|
| Model length |
270
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
93.2 | 27-248 | 222 | 1-26, 249-270 | 26 | 22 |
|
Model Sequence |
MNGMEQFECFLLDGHYGRMKATAAFLDAAKAELRQLLEGQPERRIEYSDLGMVAKFVPKPVSQVNQQQLIEDLSDYFWTTELHPLIQLDPKKLSDSQKEELAGFLLPATYYAKPSLNKKGKAYVQIPDILFGGQSEEELVAEIRNVTFQKEGYSKRYEEIKEALLNDLSLRREKKIKRDWCSFSYVEHKPAYDMERLLAELPFDFIIEHGKVQMTELKEWIGRGRLSKSVLKANQELVDLQLSFVVMSLESERKMLSGMEYRRNQLRIAQ
|
| Protein name |
Recombination-associated protein RdgC
|
| Main knot |
81 (54%)
|
| Global pLDDT |
91.07
|
| Species |
Planococcus lenghuensis
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
270
|
| ESM generation time |
2023-06-25: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
92.4 | 27-244 | 218 | 1-26, 245-270 | 26 | 26 |
|
Model Sequence |
MNGMEQFECFLLDGHYGRMKATAAFLDAAKAELRQLLEGQPERRIEYSDLGMVAKFVPKPVSQVNQQQLIEDLSDYFWTTELHPLIQLDPKKLSDSQKEELAGFLLPATYYAKPSLNKKGKAYVQIPDILFGGQSEEELVAEIRNVTFQKEGYSKRYEEIKEALLNDLSLRREKKIKRDWCSFSYVEHKPAYDMERLLAELPFDFIIEHGKVQMTELKEWIGRGRLSKSVLKANQELVDLQLSFVVMSLESERKMLSGMEYRRNQLRIAQ
|
| Domain |
Bacteria
|
| Family |
Planococcaceae
|
| Species (Full Name) |
Planococcus lenghuensis
|
| Gene |
B0X71_19505
|
| PDB structures (whole Protein) |
-
|
A0A1Q2L4I7