A0A1Q3VZR5F1

tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ (EC 2.1.1.200) (tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase) (tRNA Cm32/Um32 methyltransferase)
AF4
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Information
Protein name
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ (EC 2.1.1.200) (tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase) (tRNA Cm32/Um32 methyltransferase)
Main knot
31 (96%)
Global pLDDT
85.01
Species
Afipia sp
UniProt
Structure Prediction Model
AlphaFold v4:  A0A1Q3VZR5
PDB structures
-
Model length
409
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
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Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
92.1 105-159 55 1-104, 160-409 104 250
Model Sequence
MGDSHPSAVDSESEPMSGTDKTKTPTQPDGPVVVLVEPQLGENIGMAARAMGNFGLRRLRLVKPRDGWPNMAAQRAAAGADHILDAVELFDSVEAAVADCSLLFATTARAHDQAKPVVGPEAAAGEIIREIGQGGTAAILFGRERWGLTNEEVSLAGRIITFPVNPAFASLNLAQAVLLTGYEWFKQATGGALPFAMPERSERASSHQMQAFFDNLVAELDKVEFLRPVEKRDTMLVNLRNIFTRMEPTKQDMHTLHGVVMAIAEGRKGPAKGGVLDSDGAERLRTLLAEHGDGHGGQDSGGSVRGLARLLRRNPTDAERILWKALTTDRRFAAQFKRQTPVGRHIPDFVSFIRRVAVEVVHDGETEVVARDRARRGEWLRERGYRVVELSAAAVERDLGAALDAIAAP
Comments
Domain Bacteria
Family Nitrobacteraceae
Species (Full Name) Afipia sp. 64-13
Gene trmJ BGO65_11350
PFAM codes  PF00588,  PF04480
InterPro codes  IPR001537,  IPR004384,  IPR007569,  IPR011335,  IPR029026,  IPR029028
PDB structures (whole Protein) -