| Protein name |
Integral membrane protein
|
| Main knot |
41 (62%)
|
| Global pLDDT |
70.41
|
| Species |
Mycobacterium diernhoferi
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A1Q4HLP2
|
| PDB structures |
-
|
| Model length |
323
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
73.4 | 20-207 | 188 | 1-19, 208-323 | 19 | 116 |
|
Model Sequence |
MTQVEIDQDRLTLGSVTVTFQRTLRIPETGLHPLPPGLGRFPLRRVADYPDTAPADWLARGGIMLPIFQREAMWLSFDAFEPAALQVGVGKVCAVSGLPWIDHLTGDPQNYVPLPTQPWLDGINAGAGFIRQFVAVPLGSGATVEGQVTGEETHGGVQLRAVGLTAEALERWREAQRVVQCSPASIMECDELVACEGPAMGLGAGGRMRQEVYSDERPLADYDQSAALRVFVHLCSAEQWNAITGELPPPTPVDREAYMDAGLPWFDYYDADEADVLASEILSRIKSVGNVLGQKEDPFVPVDPSTVVKLGAGGGDVVADGTW
|
| Protein name |
Integral membrane protein
|
| Main knot |
52 (65%)
|
| Global pLDDT |
72.25
|
| Species |
Mycobacterium diernhoferi
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
323
|
| ESM generation time |
2023-06-26: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
82.1 | 1-323 | 323 | 0 | 0 |
|
Model Sequence |
MTQVEIDQDRLTLGSVTVTFQRTLRIPETGLHPLPPGLGRFPLRRVADYPDTAPADWLARGGIMLPIFQREAMWLSFDAFEPAALQVGVGKVCAVSGLPWIDHLTGDPQNYVPLPTQPWLDGINAGAGFIRQFVAVPLGSGATVEGQVTGEETHGGVQLRAVGLTAEALERWREAQRVVQCSPASIMECDELVACEGPAMGLGAGGRMRQEVYSDERPLADYDQSAALRVFVHLCSAEQWNAITGELPPPTPVDREAYMDAGLPWFDYYDADEADVLASEILSRIKSVGNVLGQKEDPFVPVDPSTVVKLGAGGGDVVADGTW
|
| Domain |
Bacteria
|
| Family |
Mycobacteriaceae
|
| Species (Full Name) |
Mycobacterium diernhoferi
|
| Gene |
BRW64_02420 BV510_04535 CRI78_23355
|
| PDB structures (whole Protein) |
-
|
A0A1Q4HLP2