A0A1Q5N7A4 | AlphaKnot 2.0

AF4

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Information

Protein name	Integral membrane protein
Main knot	5₂ (57%)
Global pLDDT	79.83
Species	Streptomyces sp
UniProt	A0A1Q5N7A4
Structure Prediction Model	AlphaFold v4: A0A1Q5N7A4
PDB structures	-
Model length	374
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					79.3	22-284	263	1-21, 285-374	21	90

Model Sequence

MGTGSVRVDGNALLLGEGVQIRFIRTLRLPESGTHALPPGLGEFPLRRVEDYPDTAPPQWLAKGGVMLPVYLREAMWLSFGGTREPAALQVGVGKVCAVSGERWTGRLARDPQNYVVPPRQPWLDGINSGDGTVRQFVAVPLGFGATVEGQVTGEETTGGVQLQAFPLEAGALAEWRRAERARAEQPRYGAPPQAPGAFGGAPAAPGGAPAAFGGYGGPPPPPMAAAPGGFPAPGAAPARGAPPAAPAMGLGVGGSMRQEVYRDDRPLSAWAPEPAARVFVHLVTPPAWRRITGEQAPPSPVDRAAYTRAGLPWFDYYDDSAADLAPSGALSGVKPVGEWLGDDHTPWAEPGPGQVKPLGNAPRPGKPVQDGDW

Comments

ESM1

Categories voted by users:

Information

Protein name	Integral membrane protein
Main knot	5₂ (66%)
Global pLDDT	71.43
Species	Streptomyces sp
UniProt	A0A1Q5N7A4
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	374
ESM generation time	2023-06-22: download the generated 3D model
AlphaKnot deposition date	2023-06-28

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					86.6	28-326	299	1-27, 327-374	27	48

Model Sequence

Comments

Domain	Bacteria
Family	Streptomycetaceae
Species (Full Name)	Streptomyces sp. CB00455
Gene	AMK16_03315
PDB structures (whole Protein)	-

A0A1Q5N7A4F1

AF4

Model Sequence

ESM1

Model Sequence